Thermococcus kodakarensis: TK1899
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Entry
TK1899 CDS
T00226
Name
(GenBank) RadA/Rad51 recombinase
KO
K04483
DNA repair protein RadA
Organism
tko
Thermococcus kodakarensis
Brite
KEGG Orthology (KO) [BR:
tko00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tko03400
]
TK1899
DNA repair and recombination proteins [BR:
tko03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Archaeal homologous recombinant proteins
TK1899
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rad51
Intein_splicing
LAGLIDADG_3
HHH_5
RecA
Hom_end
Cdd1
HHH
IMS_HHH_1
HHH_2
DNA_pol_lambd_f
ATPase
IMS_HHH
AAA_25
RecR_HhH
HHH_8
Sigma54_CBD
CPSase_L_D3
Motif
Other DBs
NCBI-ProteinID:
BAD86088
UniProt:
Q5JET4
LinkDB
All DBs
Position
complement(1707532..1710042)
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AA seq
836 aa
AA seq
DB search
MARKKKVEDEVKELEEFEELDVEESLSSSDKQSKPEKKISALEDLPGVGPATAEKLREAG
YDTIEAIAVASPLELKEIAGISEGAALKIIQAAREAANIGTFMRADEYMKRRTTIGKIST
GSKALDKLLGGGIETQAITEVFGEFGSGKCFAKDTKVYYENDTLVHFESIEDMYHKYASL
GREVPFDNGYAVPLETVSVYTFDPKTGEVKRTKASYIYREKVEKLAEIRLSNGYLLRITL
LHPVLVFRNGLQWVPAGMIKPGDLIVGIRSVPANAATIEESEAYFLGLFVAEGTSNPLSI
TTGSEELKDFIVSFIEDHDGYTPTVEVRRGLYRILFRKKTAEWLGELATSNASTKVVPER
VLNAGESAIAAFLAGYLDGDGYLTESIVELVTKSRELADGLVFLLKRLGITPRISQKTIE
GSVYYRIYITGEDRKTFEKVLEKSRIKPGEMNEGGVGRYPPALGKFLGKLYSEFRLPKRD
NETAYHILTRSRNVWFTEKTLSRIEEYFREALEKLSEARKALEMGDKPELPFPWTAITKY
GFTDRQVANYRTRGLPKRPELKEKVVSALLKEIERLEGVAKLALETIELARRLEFHEVSS
VEVVDYNDWVYDLVIPETHNFIAPNGLVLHNTQLAHTLAVMVQKPPEEGGLGGSVIWIDT
ENTFRPERIKQIAENRGLDPEETLKNIYVARAFNSNHQMLLVEKAEEIIKEKAESDRPVK
LLVVDSLMAHFRAEYVGRGTLAERQQKLAKHLADLHRLADLYDIAVFVTNQVQAKPDAFF
GDPTRPVGGHILAHSATLRVYLRKGKAGKRVARLIDSPHLPEGEAVFRITEKGVED
NT seq
2511 nt
NT seq
+upstream
nt +downstream
nt
atggcccgcaaaaagaaggttgaagatgaagtcaaagagcttgaggagtttgaagagctc
gatgttgaagagtcactttcatcgtcggataagcagtcaaagccagagaaaaaaatctcc
gctcttgaggatctccctggcgttggtcctgccaccgctgaaaagcttcgcgaggctggt
tacgacacgatagaggcaatagcggttgcctcgccgctggagcttaaggagatagcgggg
ataagcgaaggtgccgcactcaagatcatccaggccgcaagagaggcagctaacattgga
accttcatgcgcgccgacgagtacatgaagaggagaaccacaataggcaagatttccact
ggaagcaaagccctcgacaagctcctgggcggcggcattgagacgcaggccatcacggag
gtattcggtgagttcggcagtggaaagtgcttcgcaaaggacaccaaggtctactacgag
aacgatacgctagttcactttgagtccatcgaggatatgtatcacaaatacgcatccctc
ggaagagaggttccattcgacaacggctacgcggttccactggaaacggtctcggtttac
acatttgaccctaaaacaggtgaggtaaagaggacgaaggcctcttacatataccgtgaa
aaggtcgagaagcttgccgagataaggctttccaatggatatctcctcaggatcacgcta
ctgcatccggttctcgtcttcaggaacgggctccagtgggttccagctggcatgatcaag
ccgggtgacctgatcgttggcataagaagcgttcctgctaacgcagctaccattgaggag
tccgaggcttacttcctcggcctgttcgttgccgagggtacttcgaacccgctctccata
acaacaggatccgaggagcttaaggacttcatagtttcttttatcgaagatcacgacggc
tacactccgacggttgaggtaagacgcggtctctacaggatactctttagaaagaagacc
gccgagtggctcggtgagcttgccacgtcaaacgcatcaacgaaagtcgttcccgagaga
gtgctgaacgctggagaatctgccatcgcggcgtttctggctggatacttggatggggat
ggctatttaaccgagtcaatagttgagctggtcacaaagagccgtgagctcgccgatgga
cttgtcttcctacttaagaggcttggaataactccgaggatctctcagaaaacaatcgag
ggaagcgtttactaccgcatctacataacgggtgaagacaggaagaccttcgagaaagtc
cttgagaagagccgcataaagccgggcgagatgaacgagggcggcgttggcaggtatcca
cccgccctgggcaagttccttggaaagctctactcggagttcagactgcctaagagggac
aatgagacggcttaccacatactcacgagaagcaggaatgtgtggttcaccgagaagact
ctctccaggatagaagaatactttagggaagcccttgagaagctttccgaggccagaaag
gcactggaaatgggcgataaacccgagctcccgttcccgtggacggccatcacgaagtac
ggctttacagacaggcaggtggcgaactaccggacgagaggacttccaaagaggcccgag
ctgaaggagaaagttgtttcagcgctcctcaaggagattgagaggttggagggagttgca
aagcttgccctagaaacgatagagctcgcgagaaggctggagttccacgaagtctcgtcc
gttgaggtcgttgactacaacgactgggtctacgatctggtcattccagagacccacaac
ttcatcgcaccgaacggtctcgtgctccacaacacccagctcgcccacacacttgctgtc
atggttcagaagccgcccgaggaaggtggtctcggcggttccgtcatctggattgacact
gagaacaccttcaggcctgagaggataaagcagatcgccgaaaaccgcggcctcgatcct
gaggagaccctcaagaacatctacgttgcgagggcgttcaacagcaaccaccagatgctc
ctcgtcgagaaggccgaggagataatcaaggagaaggctgagagcgacaggcctgtaaaa
cttctcgtcgtggattcactcatggcgcacttccgtgccgagtacgtgggaagaggcacg
ttggctgagaggcagcagaagctcgccaagcacctcgccgacctccacagattggcagac
ctctacgacatagcggtctttgtaaccaaccaggttcaggcgaaaccggatgccttcttc
ggtgatcctacgaggcctgtcggcggccacatcctagcccacagcgccactctcagggtc
tatctccgtaagggcaaggccggaaagagggtcgctcgcctgatagacagcccgcacctt
cccgagggggaggcggtcttcaggataaccgagaagggagtcgaggactga
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