Thermococcus kodakarensis: TK2211
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Entry
TK2211 CDS
T00226
Name
(GenBank) DNA double-strand break repair ATPase Rad50 homolog
KO
K03546
DNA repair protein SbcC/Rad50
Organism
tko
Thermococcus kodakarensis
Brite
KEGG Orthology (KO) [BR:
tko00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tko03400
]
TK2211
DNA repair and recombination proteins [BR:
tko03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
TK2211
Archaeal homologous recombinant proteins
TK2211
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
Rad50_zn_hook
SMC_N
AAA_13
AAA_21
NPV_P10
AAA_29
ATG17_like
Mce4_CUP1
DUF1664
ABC_tran
SbcC_Walker_B
CCDC93_CC
EzrA
GAS
HMBD
Snapin_Pallidin
FtsK_SpoIIIE
ORF11CD3
Crescentin
ABC_ATPase
Laminin_II
DUF6011
Fib_alpha
TMF_TATA_bd
Spectrin
Motif
Other DBs
NCBI-ProteinID:
BAD86400
UniProt:
Q5JHN1
LinkDB
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Position
complement(1996427..1999078)
Genome browser
AA seq
883 aa
AA seq
DB search
MKIEKLIIKDFRSHALTKVNFSSGINLIIGQNGSGKSSILDALLVGLYWPSKPKDLKKDD
FERINGSGTEITVFFEKGNVKYQIHRNIGRGLAFVKYHDGSSWKTLETGQKPVRDWMEKL
VPYDVFLNAIYIRQGEIDAILESDESREKVVRQVLGLDRYENSYKNLLDVRKEIDARIKA
IEDYLKSTENIDELIGNLEKELTSVLREINEISPKLPELRGELGGLEKELKELEKTAEEL
AKARVELKSEEGNLRELEAKKSGIQSMIRETEKRVEELKEKVKELESLEEKAKEYERLSR
FYRNFTEGINRIEKLLATYSQQAENLRERIDELSKKEARVKELLKEKEGLQKELGALEED
LKAYQRAKELMANLERLKKRLTLSEEEIEKLEAEIQKARERKEEIMKELEEIGSRRGELK
SIAGERNKALMELKKAKGRCPVCGRELTEEHRKELLEKYTAELKEISAEMKELEKREKKL
RAELVEVEKTLKKERELFALKEVLEQIRETEEKLKEYDLEKLEEANEKAEELKKKLAGLE
GEIKSLEDEIKKGELLKKKLALVEKKLRELEEERASLLGELKKLGFGDVKELEERLKELE
PAYKRYIELRPARDELKREEDLLKSLKLDLTAILKEIEKTSKRVEELRKRVEELEKSYDK
DRHEELKGKTRELSNELAGLEARLKSLEERRDEVKASLEKLREEKETRKEKAKELEKLKK
ARERVQRLREKVKAYKNLLKEGALAKVGEMASEIFEELTEEKYSGVTVKAEENKVRLGVV
YNGKEYGLGFLSGGERIALGLAFRLALSLYLAGEISLLILDEPTPYLDEERRRRLVDIMQ
RYLRKIPQVIVVSHDEELKDAADRVIRVSLENGVSVVREAEVG
NT seq
2652 nt
NT seq
+upstream
nt +downstream
nt
atgaagattgaaaagctcataataaaggacttccgctctcacgccctcacgaaggtgaac
ttctcgagcgggataaacctgataatcggccagaacgggagcgggaagagctctatcctc
gatgccctcctcgtggggctctactggccgtcaaagccgaaagacctgaaaaaggacgac
ttcgagaggataaacgggagcgggacggaaattaccgtgttcttcgagaaggggaacgtg
aagtaccagatacacaggaacatcggcaggggactggcctttgtgaagtaccacgacgga
agctcctggaagacccttgagacgggccagaagcccgtgagggattggatggagaagctg
gttccctacgatgtcttcctcaacgcgatctacatccgacagggcgagatagacgctatc
ctcgagagcgacgagagcagggaaaaagtagtcaggcaggttctcggcctcgatcgatac
gaaaactcctacaagaaccttctggatgtgagaaaggagattgatgcaaggataaaggca
atcgaggactacctcaagagcaccgagaacatagacgagctaataggaaacctcgaaaag
gagctcacttccgtcctcagggaaataaacgaaatctcgccgaaactcccggagctgaga
ggggagcttggggggcttgagaaggagctgaaggaacttgaaaaaactgctgaggaactc
gcaaaggcaagggtcgagctgaagagtgaagagggaaacctgagggagctggaggctaag
aagagcggaatccagagcatgatcagggaaaccgagaagagggttgaagaactgaaggag
aaggtaaaggagcttgagagcctggaggaaaaggcaaaggaatacgaaaggctctctagg
ttctacaggaactttaccgagggcataaacagaatagaaaagctcctggccacttactcc
cagcaggcggagaacctgagggagcgcattgacgagctgagcaagaaagaggcccgagtg
aaggagctcctgaaggagaaagaaggacttcaaaaagagctgggagccctcgaagaggac
ctcaaagcataccagagggctaaggagctgatggccaaccttgagaggctgaagaagagg
ctcacgctgagcgaggaggaaatagaaaagctagaagcagaaatccaaaaggccagggag
agaaaggaagagatcatgaaagaactcgaggagataggctcaaggaggggcgagctgaag
agcattgctggtgagaggaacaaggcgctaatggagctcaagaaggcaaagggcagatgc
ccggtctgcgggagggagctgaccgaggagcacagaaaggagctcctcgagaagtacacg
gccgagctgaaggagatctccgccgagatgaaagagctcgaaaagagggaaaagaagctc
agggccgagctcgtggaggtcgagaagacgctgaagaaggagagggagctgttcgccctc
aaagaagtccttgagcagatcagggaaaccgaggagaagctcaaggaatacgacctcgaa
aagctcgaagaggccaacgagaaagccgaagagctgaagaaaaagctggctggtttagag
ggcgagataaaaagcctggaggatgagattaagaaaggggagctcctcaagaagaagctc
gcccttgtagaaaagaagctgagggagcttgaggaggagagggcttcccttctcggcgag
ctgaaaaagctcggatttggagacgttaaggagcttgaggagaggctgaaagagctcgag
cccgcttacaagcgctacatcgagcttaggccagcgagggacgagctcaagcgggaggaa
gaccttctgaagagcctcaagcttgatctcacggccattcttaaggaaatcgagaagacc
tcgaagagggtcgaggagctgaggaagagagttgaagagctcgaaaagtcctacgataag
gacagacacgaggagctgaaggggaagacgagggagctttcaaacgagcttgctggcctt
gaggcccgcctgaagtcgctcgaagaacgcagggacgaggtaaaggccagccttgagaag
ctgagggaggagaaggaaaccagaaaggagaaggcaaaggagcttgagaagctcaagaaa
gcgagagagcgcgtgcagaggctcagggagaaggttaaggcctacaagaacctgctcaag
gaaggggccttggccaaggttggcgagatggcgagcgagatatttgaggagcttaccgag
gaaaaatattcgggagtcaccgtgaaggccgaggagaacaaggtgaggctcggcgtggtc
tacaacggaaaggaatacggactcggcttcctcagcggcggcgagaggatagctttaggc
cttgctttcaggcttgccctctccctatacctcgccggagagataagcctgctcattctc
gacgagccgacgccgtacctcgacgaggagaggaggagaaggctcgtggacataatgcag
cgctacctcaggaagataccgcaggtcatcgttgtttcccacgacgaggagctgaaggac
gcggcggatagggtgataagggtgagccttgagaacggcgtttcagtcgtcagggaagcg
gaggtgggctga
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