Thermococcus kodakarensis: TK2212
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Entry
TK2212 CDS
T00226
Name
(GenBank) DNA repair exonuclease Rad32/Mre11 homolog
KO
K03547
DNA repair protein SbcD/Mre11
Organism
tko
Thermococcus kodakarensis
Brite
KEGG Orthology (KO) [BR:
tko00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tko03400
]
TK2212
DNA repair and recombination proteins [BR:
tko03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
TK2212
Archaeal homologous recombinant proteins
TK2212
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Mre11_2nd
Metallophos
Metallophos_2
DUF5327
Motif
Other DBs
NCBI-ProteinID:
BAD86401
UniProt:
Q5JHP8
LinkDB
All DBs
Position
complement(1999075..2000457)
Genome browser
AA seq
460 aa
AA seq
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MKFAHIADVHLGFEQYRLPYRADEFAEAFRRAIEIAVEEKVDFILIAGDLFHSSRPSPET
LKQAMEILSLPKEKGIPVFGIEGNHDRTQRRVSAYHLLEKLGLLYLIGLREEKVESEHQT
SEKTERGWLVKGVFEKGNKSVEIHGMKYMSAAWLEKNPPKEIFRPEGDSILMLHQGVREL
VEEMMGKLPESQRDYYELKLGDLPKGYLYYALGHIHRAFLTSYDIGKLVYPGSLQRWDFG
DYEIRYRWDGNTFKPTAGNPKGFYIVEDWEPRFVELNVRPFIDVNIKADEETAKRELKRL
STKIPEEAFVRLDIRWERPYDVSKLTELIKARYVYVRTRFERKLTGRTPSGEVPKPEEYF
IPVELKAINLTGEKAIESIEEVVELFLGEGWDEKLPKKTEEPERKEDATAKKEGGPEKEK
RPKTQGKEQRETKERKDSEKKVVKRPSKGSNLLDWLGGGR
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atgaagttcgcacacatagctgacgttcatctcggcttcgagcagtaccgcctgccgtat
agagccgacgagttcgcggaggcattcaggcgggcgattgagatagccgtagaggagaag
gtggacttcatactcatagctggagacctcttccactccagcagacccagccctgaaacg
ctgaaacaggcgatggaaatactctcactgccgaaggagaagggcataccagtttttgga
atcgagggaaaccacgacaggacgcagaggagggtttctgcttaccatctcctcgaaaag
ctcggcctgctctacctcatcggcctcagggaggagaaggttgagagcgagcaccagacg
agcgagaagaccgagaggggctggctcgttaaaggggtttttgagaagggcaacaaaagc
gtcgagatacacggtatgaagtacatgagtgcggcgtggctcgaaaagaacccgccgaag
gagatattcaggccggagggggactccatactcatgctccaccaaggggttagggaactc
gtcgaggagatgatgggcaaactgcctgagagccagcgcgactactacgagctcaagctc
ggcgacctgccgaagggctacctctactacgccctcggccacatccacagggcgttcctg
acgagctacgacatcggaaagctcgtctatcccggctcgctccagaggtgggacttcggg
gactacgagataaggtaccgctgggacgggaataccttcaaaccgaccgctgggaaccct
aagggcttctacatcgtcgaggactgggagccgaggttcgtggagctgaatgtcaggccc
ttcattgacgtcaacataaaggccgacgaagagacagcaaagagggagctgaagcgcctc
tccaccaagattccagaggaagcctttgtgaggctcgacatccgctgggagaggccctac
gacgtttcaaagctcaccgagctgataaaggcccgctacgtctacgtgaggacgaggttc
gagaggaagctgaccggaagaaccccctcgggagaagttccaaagccagaggagtacttc
attcccgtcgagctgaaggcgataaacctcacgggcgaaaaggctatcgagtctattgaa
gaagtcgttgagctcttcctgggtgagggatgggacgagaagcttcctaagaaaactgaa
gagcccgaaaggaaagaagatgctacagccaagaaagaaggaggccctgagaaagaaaag
aggcccaaaacccaagggaaagaacagagggagacgaaagagcgcaaggactctgaaaag
aaggtcgttaaaaggccttccaaaggttcaaacctcctcgactggctcggtggtgggaga
tga
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