KEGG   Thermococcus kodakarensis: TK2218
Entry
TK2218            CDS       T00226                                 
Name
(GenBank) replication factor C, small subunit
  KO
K04801  replication factor C small subunit
Organism
tko  Thermococcus kodakarensis
Pathway
tko03030  DNA replication
Brite
KEGG Orthology (KO) [BR:tko00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    TK2218
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:tko03032]
    TK2218
DNA replication proteins [BR:tko03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (archaeal)
    RFC (replication factor C)
     TK2218
SSDB
Motif
Pfam: LAGLIDADG_3 Rep_fac_C Intein_splicing AAA DNA_pol3_delta2 HTH_3 RuvB_N RCF1-5-like_lid DUF4364 AAA_assoc_2 Rad17 HTH_19 LAGLIDADG_WhiA Inhibitor_I29 Hint
Other DBs
NCBI-ProteinID: BAD86407
UniProt: Q5JHP2
LinkDB
Position
2005901..2008501
AA seq 866 aa
MSEEVKEVKILEKPWVEKYRPQRLEDIVGQDHIVKRLKHYVKTGSMPHLLFAGPPGVGKC
LTGDAKVIANGRLFELGELVEKVSKGRFGPTPVEGLKVLGIDEDGKLREFEVQYVYKDRA
ERLIKVRTRLGRELKVTPYHPLLVNRKNGEIMWVKAEELRPGDRLAVPRFLPAIAEEDPL
AEWLGYFIGDGHADSKNKVITFTNTDPSLRQRFMELTERLFPDAKIRERIHKNRAPDVYV
NSRRAWELVSSLGLAGRKADKVYIPEKGWEGIRSFLRAYFDCDAGVDKNAVVLATASREM
AEQVTYALAGFGITSKIREKKVRGKTYYHVTISGSENLERFLSEIGFSHREKLERTLKLV
KKPNPNLDSLNVNYELISYVRDRLKLNFSDDKRSWSHRKARKISWELMKEIYYRLDELER
LKESLSRSILIDWNEMAERRKEIAEKTGIRADRLLEYIKGKRKPSLRNYIKIAKALGIDL
EPTINAMRVFARKYSSYAEIGRKLGTWNSSVRIILESNTEKIKELEEIRKIELELIGEIL
SDEKLKEGVAYLIFLSQNELYWDEITEVKELKGDFVIYDLHVPGYHNFIAGNMPTVVHNT
TAALALARELFGENWRHNFLELNASDERGINVIREKVKEFARTKPIGGASFKIIFLDEAD
ALTQDAQQALRRTMEMFSNNVRFILSCNYSSKIIEPIQSRCAIFRFRPLRDEDIAKRIRY
IAENEGLELTEEGLQAILYVAEGDLRRAINVLQAAAALDTKITDENVFLVASRARPEDVR
EMMTLALEGNFLKAREKLRDILLRQGLSGEDVLIQMHKEVFNLPIPEDKKVALADKIGEY
NFRLVEGANEMIQLEALLAQFTIMGK
NT seq 2601 nt   +upstreamnt  +downstreamnt
atgtccgaggaagtgaaggaagttaaaattctcgaaaagccgtgggtcgagaagtacaga
ccccagaggctcgaggacatagtaggtcaggatcacatagtcaagaggctgaagcactac
gttaaaaccggctcgatgccgcaccttctattcgcagggccacccggcgtcgggaagtgc
ctcactggggatgctaaggtcatagccaacggcaggctctttgagctgggagaactcgtt
gaaaaagtttccaagggtaggttcggccccacaccagttgaaggtctcaaagtccttgga
atagatgaggacggaaagctgagggagttcgaggttcagtacgtctacaaggacagggcc
gagaggctgataaaggtaaggactcgcctcggtagggagctcaaggtcactccctatcac
ccgctactcgtgaacaggaaaaacggggagatcatgtgggtaaaggctgaggaactcaga
ccaggcgacaggcttgccgtgccgcgcttccttccggccatagctgaggaagaccccctg
gctgagtggcttggctattttattggggacggccacgccgactcgaagaataaagtaatc
acctttacaaacacagacccatctttaaggcagcgctttatggagctgaccgagaggctc
ttcccagatgcgaagatcagggaaagaatccacaaaaacagggcaccggacgtttacgtg
aactcacggagggcctgggagcttgtaagttcgcttggtttggccgggagaaaagcggat
aaggtttacatacctgagaaaggctgggaggggattcgctccttcctcagggcatacttt
gactgcgatgctggagttgataagaacgccgtagtactggcaactgccagcagggaaatg
gcggagcaggtgacctatgccttagctggttttggaataacctcaaagataagggagaaa
aaagtcaggggtaagacatactaccatgtcacaatctcaggttcagagaacttggagagg
tttctgagcgagatcggcttctcccacagggaaaaattggaaagaaccctaaagctcgtc
aagaagcccaacccgaacctcgacagcttgaatgtcaactatgaacttatctcctacgtt
agagacaggcttaagctaaacttctccgacgataagaggagctggagccacagaaaggct
agaaagatctcgtgggagctgatgaaggaaatttactaccgcctcgatgagcttgagaga
ctgaaagaatccctctcaaggagcatcctcatagactggaacgagatggcggagcggaga
aaggagatagcggaaaagacggggattagggccgacagactcctcgagtacattaagggc
aagaggaagccgagcctgaggaactacatcaagatagcgaaggcccttgggatcgacctt
gaacctacgattaatgccatgagggtctttgcaaggaagtactcaagctatgccgaaatc
ggaaggaaactcggcacctggaactccagcgtgagaataattcttgagagcaacacggag
aagatcaaggaacttgaggaaataaggaaaatcgagctcgaactaataggggaaatcctc
tccgacgagaagcttaaggaaggggtagcatacctgatattcctctcccagaatgagctc
tactgggacgagataaccgaagtgaaggagcttaagggcgacttcgtcatctacgacctc
cacgttccaggataccacaacttcatcgccggaaacatgccgacggttgttcacaacaca
accgctgcactggctttagctagagaactcttcggtgagaactggaggcacaacttccta
gagctgaacgcgagcgatgagaggggtataaacgtcatccgtgaaaaggtaaaggagttc
gcgaggacgaagccgataggcggtgcgagctttaagataatcttccttgatgaggcagat
gccctcacacaggacgctcagcaggccctcagaaggacgatggagatgttctcgaacaac
gtccgctttatcctgagctgtaactactcctcaaagatcatcgaacccatacagtcgagg
tgtgccatcttccgcttcagaccgctccgcgatgaggacatagcgaagcgcatcaggtac
atagccgaaaatgagggtctcgagctcaccgaggaaggcctgcaggcgatactctacgtc
gctgagggcgatctcaggagggcaatcaacgtccttcaggcggcagcagccctcgacacg
aagataaccgacgagaacgtcttcctcgtggccagcagggcgaggcctgaagacgtacgt
gaaatgatgacccttgctctggaaggcaacttcctgaaggccagagagaagctgagggat
atcctgttaaggcagggcctcagcggtgaagatgtcctcatccagatgcacaaggaggtc
ttcaacctcccgattcccgaggacaagaaggtggccctggcggacaagataggagagtac
aacttccgcctggttgaaggggctaacgagatgatacagctcgaggcactccttgcccag
ttcacgattatgggtaagtga

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