KEGG   Thermococcus kodakarensis: TK2219
Entry
TK2219            CDS       T00226                                 
Name
(GenBank) replication factor C, large subunit
  KO
K04800  replication factor C large subunit
Organism
tko  Thermococcus kodakarensis
Pathway
tko03030  DNA replication
Brite
KEGG Orthology (KO) [BR:tko00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    TK2219
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:tko03032]
    TK2219
DNA replication proteins [BR:tko03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (archaeal)
    RFC (replication factor C)
     TK2219
SSDB
Motif
Pfam: AAA Rad17 AAA_14 AAA_22 RuvB_N nSTAND3 AAA_5 DUF815 AAA_16 DNA_pol3_delta AAA_17 AAA_11 AAA_18 AAA_30 AAA_33 AAA_28 AAA_6 AAA_24 Zeta_toxin AAA_25 T2SSE AAA_7 ResIII AAA_assoc_2 AAA_19 TsaE Gp44_lid PPV_E1_C RNA_helicase ABC_tran RsgA_GTPase HrcA_DNA-bdg
Other DBs
NCBI-ProteinID: BAD86408
UniProt: Q5JHP1
LinkDB
Position
2008507..2010006
AA seq 499 aa
MTEVPWVEKYRPRKLSEIVNQEKALEQVRAWVEAWLHGNPPKKKALLLAGPPGVGKTTTV
YALANEYGFEVIELNASDERTYEKIERYVQAAYTMDILGKRRKLIFLDEADNIEPSGARE
IAKLIDKARNPIIMSANHYWEVPREIRNKAQIVEYKRLTQRDIIKALVRILKREGLEVPK
EVLYEIAKRANGDLRAAVNDLQTVVTGGVEDAVEVLAYRDTEKSVFQALAQLFATDNAKR
AKLAVLGVDMMPNELLQWIDENVPYVYYRPEDIARAYEALSRADIYLGRAQRTGNYGLWK
YATDMMTAGVAVAGIKKKGFVKIYPPKTIKLLTESKEERSLRDSVIKKIMSEMHMAKLEA
IETLRYLRVIFENNPDLAAHFVVFLDLSEKEVEFITGDKEKAKTIWAKSMNIEKKLKKEG
ELEARAKEAERRVEAAEEEETMEAGEPEEELEEVEEEELTEEELEEAEEEIETVGKKEKP
EKEKTKKGKQATLFDFLKK
NT seq 1500 nt   +upstreamnt  +downstreamnt
atgacggaagtcccatgggttgaaaaatacagacctaggaagctcagcgagatagtaaac
caggagaaagcgttagagcaggttagggcgtgggtcgaagcctggctccacggaaatccg
ccgaagaagaaggccctccttctagcaggcccccctggagtcggcaaaacgaccaccgtc
tatgccctggccaacgagtacggcttcgaggtcatcgagctcaacgcaagcgacgagagg
acgtatgaaaagatagagcgctacgttcaagctgcatacactatggatattctcggaaag
aggaggaagctgatattccttgacgaggctgacaacatcgagccctctggggcgagggag
atagcgaagctcatcgacaaggccagaaacccgataataatgagcgccaaccactactgg
gaggttcccagggagatacgcaacaaagcccagatagtcgagtacaagaggttgacgcag
agggacatcataaaggccctcgtgagaatcctcaagcgtgagggactcgaagttcccaag
gaggttctctacgagatagcgaagagggctaacggcgacctgagggcagctgtaaacgat
cttcagaccgttgttaccggtggagtcgaggatgccgttgaagtcctggcttaccgcgac
actgagaagagcgttttccaggcgcttgcccagctgttcgcaacggacaacgccaagagg
gcaaagttagctgttcttggagttgacatgatgcctaacgagcttctccagtggatagac
gagaacgtcccgtatgtctactacaggcctgaagacatagcgagggcctacgaggcgctc
agcagggctgacatatacctcggtagggcacagaggactggaaactacggcctctggaag
tacgcgaccgacatgatgacggctggggtggcggtcgctggcatcaagaagaagggcttc
gttaagatctacccacctaagacgataaagctcctcaccgagagcaaggaggagcgttcg
ctcagggactcagtaatcaagaagataatgagcgagatgcacatggctaagcttgaggcc
atagagaccctccgctaccttagagttatcttcgagaacaaccccgatttggcggcccac
tttgtcgttttcctcgacctcagcgagaaggaagttgagttcataactggagacaaggag
aaggcgaagacgatatgggcaaagagcatgaacattgagaagaaactcaaaaaagaaggc
gagcttgaggcgagagcaaaggaagccgaaagaagggtggaagcggctgaggaagaggaa
actatggaagctggggaacctgaagaagaacttgaagaagtcgaggaggaagagttaacc
gaggaggagcttgaggaagcggaggaagagatagagaccgttgggaagaaggagaagccc
gagaaggagaaaaccaagaagggcaagcaggcgacgctgttcgacttcctcaagaagtga

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