Thermococcus kodakarensis: TK2290
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Entry
TK2290 CDS
T00226
Name
(GenBank) ribulose 1,5-bisphosphate carboxylase/oxygenase, typeIII
KO
K01601
ribulose-bisphosphate carboxylase large chain [EC:
4.1.1.39
]
Organism
tko
Thermococcus kodakarensis
Pathway
tko00630
Glyoxylate and dicarboxylate metabolism
tko00710
Carbon fixation by Calvin cycle
tko01100
Metabolic pathways
tko01110
Biosynthesis of secondary metabolites
tko01120
Microbial metabolism in diverse environments
tko01200
Carbon metabolism
Module
tko_M00968
Pentose bisphosphate pathway (nucleoside degradation), archaea, nucleoside/NMP => 3-PGA/glycerone phosphate
Brite
KEGG Orthology (KO) [BR:
tko00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
TK2290
09102 Energy metabolism
00710 Carbon fixation by Calvin cycle
TK2290
Enzymes [BR:
tko01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.39 ribulose-bisphosphate carboxylase
TK2290
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Gene cluster
GFIT
Motif
Pfam:
RuBisCO_large
RuBisCO_large_N
Motif
Other DBs
NCBI-ProteinID:
BAD86479
UniProt:
O93627
Structure
PDB
PDBj
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Position
2073450..2074784
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AA seq
444 aa
AA seq
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MVEKFDTIYDYYVDKGYEPSKKRDIIAVFRVTPAEGYTIEQAAGAVAAESSTGTWTTLYP
WYEQERWADLSAKAYDFHDMGDGSWIVRIAYPFHAFEEANLPGLLASIAGNIFGMKRVKG
LRLEDLYFPEKLIREFDGPAFGIEGVRKMLEIKDRPIYGVVPKPKVGYSPEEFEKLAYDL
LSNGADYMKDDENLTSPWYNRFEERAEIMAKIIDKVENETGEKKTWFANITADLLEMEQR
LEVLADLGLKHAMVDVVITGWGALRYIRDLAADYGLAIHGHRAMHAAFTRNPYHGISMFV
LAKLYRLIGIDQLHVGTAGAGKLEGGKWDVIQNARILRESHYKPDENDVFHLEQKFYSIK
AAFPTSSGGLHPGNIQPVIEALGTDIVLQLGGGTLGHPDGPAAGARAVRQAIDAIMQGIP
LDEYAKTHKELARALEKWGHVTPV
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atggttgagaagtttgatacgatatacgactactatgttgacaagggctacgagcccagc
aagaagagggacatcatagctgtattccgtgtgacgccggcagagggctacactatcgag
caggcggctggagccgtggcagctgagagctcaactggaacctggacgacactctatccc
tggtacgagcaggagagatgggccgacctctcggccaaggcctacgacttccacgacatg
ggcgacggcagctggatagtcagaatagcctacccgttccacgcctttgaggaggccaac
cttccgggccttctcgcgagcatagccggaaacattttcggaatgaagcgcgtaaagggg
ctccgccttgaggatctttacttcccggagaagctcataagggagttcgacggcccggcc
ttcggtatcgagggcgtaaggaagatgctcgagattaaggacaggcctatctatggtgtc
gttccaaagccaaaggtcggttattctccggaggagttcgagaagctggcctacgacctt
ctctcaaacggtgccgactacatgaaggacgacgagaacctcacgagcccgtggtacaac
cgcttcgaggagagggccgagataatggcgaagataattgacaaggtagagaacgagacg
ggtgagaagaagacatggttcgcgaacataaccgctgacctcctcgaaatggagcagagg
cttgaggttcttgctgaccttggtctcaagcatgcgatggttgatgttgttataaccggc
tggggagcgctaaggtacatcagggacctcgcggccgattacgggcttgccatccacggc
cacagggcaatgcacgcggccttcacgaggaacccgtaccacggcatctcgatgttcgtt
cttgcgaagctttacaggctcataggcattgaccagctccacgttggaaccgctggagct
ggcaagcttgagggcggcaagtgggacgtcattcagaacgccaggattctcagggagagc
cactacaagcccgatgaaaacgacgtcttccaccttgagcagaagttctacagcataaag
gccgcgttcccgacaagctctggtggattacatccgggcaacatccagcccgttatagag
gccctcggaaccgacatagtcctccagctcggaggtggaaccctcggccatccggacggg
cctgccgcaggtgcacgggcagtcaggcaggcaatcgatgccataatgcagggaataccg
ctcgacgagtacgcgaagactcacaaggagcttgcgagggccctggagaagtggggtcac
gttactccagtctga
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