Thermococcus kodakarensis: TK2302
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Entry
TK2302 CDS
T00226
Name
(GenBank) tRNA pseudouridine synthase D
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
tko
Thermococcus kodakarensis
Brite
KEGG Orthology (KO) [BR:
tko00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tko03016
]
TK2302
Enzymes [BR:
tko01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
TK2302
Transfer RNA biogenesis [BR:
tko03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
TK2302
Prokaryotic type
TK2302
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
BAD86491
UniProt:
Q5JDB6
LinkDB
All DBs
Position
complement(2083417..2084667)
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AA seq
416 aa
AA seq
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MDYREFFSQFKHLSEKPGIGGKIKIYPEDFIVIEEPIPSIFEGRKYAIFLLKKRNWETMA
AVKEIAKRAGINYREIGFAGTKDRHAVTYQYISVPAEARERVEQVSIRDIELRFVSYGRF
IKLGHLLGNRFRIIVRDVSEDAFDRTKEIVRELREKGGFPNYFGYQRFGERRVVNHIIGK
LLLQGDFEGAARLFLGAHDGSMEGDEARKNFWETGDVERALEEFPGFLRYERTLLHRYKD
TGNWKRAFLSLPLPIMRIFIHAYQSYLFNLYLSRRIEEGLPLNEPLVGDIVVQVKGGIPY
RDRTYRVTETNLEFVREKVRKNQAMVSGPLFGFAMRRAKGLPGELEKEILEEEGLSLETF
RRLPKPMAEPGGRRELLLRPMGMAYGYIQEEGMCFRFFLPKGTYATSVLREIMKDH
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atggactaccgcgagttcttctcccaattcaagcacctcagcgagaagcctgggataggc
gggaagataaaaatttaccccgaggacttcattgtaatagaagagcctatcccttcaatc
tttgaaggaaggaagtacgccatcttcctcctcaagaagcggaactgggagacgatggcg
gcagtgaaggaaatagccaagagggcagggataaactacagggaaatcggcttcgctgga
acgaaggacaggcacgcggtcacctaccagtacataagcgtgccggccgaggccagggaa
agggttgagcaggtgagtatcagggacattgaactgcgcttcgtctcctacggcaggttc
atcaagctcggacatcttctcggcaacaggttcaggataatagttagagatgtcagcgaa
gatgcctttgataggactaaggaaatagtgcgggagctcagggagaagggcggcttcccc
aactacttcggctaccagaggttcggagaaaggagggtagtaaaccacataataggcaaa
ctgctccttcagggggactttgaaggagctgcgaggctcttcttaggggcgcacgatgga
agcatggaaggagatgaagccagaaagaacttctgggagaccggagacgttgagagggcg
cttgaggagttcccgggctttctgaggtatgaaagaacgctcctccacaggtacaaagat
actgggaactggaagagggcctttctcagccttccgctcccaataatgcgcatattcatc
cacgcctaccagagctacctcttcaacctctacctctcgaggaggattgaagagggcctg
cccctgaacgaacccctcgtcggtgacatagtggtgcaggtcaagggaggaattccatac
agggacaggacttaccgcgtaactgagaccaaccttgagttcgtgagggaaaaggtaagg
aagaaccaagctatggtttcaggtccgctctttgggttcgcgatgaggagggcaaagggc
cttccaggagagcttgagaaagaaatacttgaggaagagggcctaagcctcgaaaccttc
aggaggctgccgaagcctatggccgaacctggcgggagaagagagctcctactgaggccc
atggggatggcctatgggtacatccaggaggagggaatgtgcttccgcttcttcctgccg
aagggaacatacgccacgagcgttctcagggaaatcatgaaagatcactga
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