Tetragenococcus koreensis: C7K43_01160
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Entry
C7K43_01160 CDS
T05710
Name
(GenBank) recombinase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
tkr
Tetragenococcus koreensis
Pathway
tkr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tkr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
C7K43_01160
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tkr03019
]
C7K43_01160
03400 DNA repair and recombination proteins [BR:
tkr03400
]
C7K43_01160
Enzymes [BR:
tkr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
C7K43_01160
Messenger RNA biogenesis [BR:
tkr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
C7K43_01160
DNA repair and recombination proteins [BR:
tkr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
C7K43_01160
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
RecQ_Zn_bind
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
AYW44646
LinkDB
All DBs
Position
221645..223036
Genome browser
AA seq
463 aa
AA seq
DB search
MLEEALYRYFHYKQFRPGQKEAISSLLQGKDTLAVLPTGTGKSLCYQLPAYLKEGTILIV
TPLISLMEDQLSSLQKYGEKRGVILNGNLNEQDKMYILEHLMNYKFVFLSPEMLMQEKIL
SRLQLVEIALFVVDEAHCISQWGIDFRPEYRNLKQAKKRLGNPITLALTATATNEVKEEI
KTVLLNQNTDEYYDSVDRPNISLSVIQSKAKLADLKKILTNAKGSVLIYCATRKKVEELY
YQLKNKYTIGYYHGGLDSSQRRLLQQQFINDQLQFLVCTNAFGMGVDKPDIRTVIHYELP
DSMENYMQEIGRSGRDQKPSDAILLYQSKDEKIHYFMQQQAQQERELFEFRLEQKQLINL
TELQEKWLRQIKISGKDFFLAQLRQNETEKQKKLEQMLGYVRYNGCRREFLLKYFGETLT
EVPDRCCDFHGISNTSIEVKNFNFSAERMHWQDILLKMFKEEK
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atgttagaagaagcattatatcgttattttcattataagcaatttcgcccggggcaaaaa
gaagccatctcatcgttattgcagggcaaagatactttagctgtgcttccaacagggaca
ggtaaaagcctttgttatcaacttcctgcttacctaaaggaggggacaatattaattgtt
acaccattgatttccttaatggaagatcaactttcttctttacaaaaatatggtgaaaaa
cgtggcgttattctaaacggaaatttaaatgaacaagataaaatgtatattttagaacac
cttatgaactataaatttgtttttttaagtccagaaatgctgatgcaagaaaaaattcta
tctcgcttacagcttgttgagattgccttatttgtggttgatgaagcccattgtatttcc
cagtggggaattgattttcgtcctgagtatcggaatttgaaacaagcaaaaaaacggttg
ggaaatccgataactttagctttgactgctacagctaccaatgaggtcaaagaagagatc
aaaacagtattgcttaaccagaatacagatgagtattatgattctgttgatcgacccaac
atttctttatctgtaattcagtcaaaagcaaaattagctgatttgaaaaaaatactgaca
aatgctaaagggtcagttcttatctactgtgcaaccagaaaaaaagtggaagaactgtat
tatcaattaaaaaataaatatactattggctattatcatggtggtttagacagtagccaa
agaagacttttgcagcaacaatttatcaacgaccagctacagtttctcgtttgtaccaat
gcgtttggtatgggagttgataagcccgatatccggacagtcatccattatgagctacca
gatagtatggagaactatatgcaagaaattgggcgaagtggacgggatcaaaaacctagc
gatgcgattcttttatatcaatcaaaagacgagaaaatccattactttatgcagcaacag
gctcagcaagaacgggagctttttgaatttcgcttagaacagaaacaactaataaattta
acagaactacaagaaaagtggttgcgacagataaaaatttcgggaaaagattttttctta
gctcaactaaggcaaaatgagacagagaaacagaaaaagcttgaacaaatgcttggatat
gtccggtataacggatgtcgccgagaatttttattaaaatattttggtgaaacattgaca
gaagttcctgatagatgttgtgattttcatggcatatcaaatacatcaatcgaagtaaaa
aactttaatttttcagcagaaagaatgcattggcaagatattttactaaaaatgtttaaa
gaagaaaaatga
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