Tetragenococcus koreensis: C7K43_02650
Help
Entry
C7K43_02650 CDS
T05710
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
tkr
Tetragenococcus koreensis
Brite
KEGG Orthology (KO) [BR:
tkr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tkr03016
]
C7K43_02650
Enzymes [BR:
tkr01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
C7K43_02650
Transfer RNA biogenesis [BR:
tkr03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
C7K43_02650
Prokaryotic type
C7K43_02650
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
AYW44921
LinkDB
All DBs
Position
544960..545877
Genome browser
AA seq
305 aa
AA seq
DB search
MDGILPLWKERGMTSHDCVFKLRKILHTKKVGHGGTLDPDVDGILPICIGKGTKVIEFLT
DSGKEYEGEITLGYATTTEDVSGEIIQRDAITAPFSTAEIDKVMQTFVGELTQIPPMYSA
VKVNGKRLYEYARNGQTVVRPQRKVHIDSFVRTSTPSYQEEKKLQSWRFKVACGKGTYVR
TLAVDTGKALGVSAHMSDLTRTKSAGFSKEQSVTLDQVQKAMTEDKIDDLLLPIEYGVQG
FQRIDISDELWQKVRNGMRLPYQAFQLAEMPTEPVAVFYQNQVVSLYEPNKNEKNGLKPL
KVLQN
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atggacggaattttacctctttggaaggaacgcggcatgaccagtcatgattgcgtattt
aaattaagaaagattttacatacaaaaaaagtaggtcacggaggaacccttgatccggat
gttgatggcatattgcccatttgtatcggaaaaggaacaaaagtgattgaatttttaacg
gactcgggaaaagagtatgaaggtgaaatcaccttaggttatgcgacaactactgaagat
gtttcaggagaaattattcaacgtgatgcgatcacagctcccttttcaactgctgaaatt
gacaaggttatgcagacatttgtgggagagcttacccagattccgccgatgtattcagcg
gtaaaagtgaatgggaagcgtctctatgaatatgcaagaaatggtcaaacggtggttaga
ccacaacgcaaggtacacattgattctttcgtccgtacgagtactccttcttatcaagaa
gagaagaaactacaatcttggcggtttaaagttgcttgtggtaaaggaacttacgtccgg
actttagctgttgatactgggaaagctctcggcgtaagtgcacatatgtctgatttaact
cgtacgaaaagtgctggtttcagcaaagaacaatctgtgactttagatcaagtacaaaaa
gcaatgacagaagataagatcgatgatttattattacctattgaatatggcgttcaaggt
tttcaaagaatcgatatttctgacgaattatggcaaaaagtacgaaacggcatgcgtcta
ccttaccaagcttttcagttagcagaaatgccaacagaacctgtggctgttttttatcaa
aatcaagtggtaagtttgtatgaacccaataaaaatgaaaaaaatggcttaaaaccattg
aaagtattacagaactga
DBGET
integrated database retrieval system
