Tetragenococcus koreensis: C7K43_02785
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Entry
C7K43_02785 CDS
T05710
Symbol
addA
Name
(GenBank) helicase-exonuclease AddAB subunit AddA
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
tkr
Tetragenococcus koreensis
Brite
KEGG Orthology (KO) [BR:
tkr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tkr03400
]
C7K43_02785 (addA)
Enzymes [BR:
tkr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
C7K43_02785 (addA)
DNA repair and recombination proteins [BR:
tkr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
C7K43_02785 (addA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
DEAD
AAA_12
ResIII
NPHP3_N
AAA_22
AAA_30
AAA_16
DUF2059
Motif
Other DBs
NCBI-ProteinID:
AYW44948
UniProt:
A0AAN4RJ31
LinkDB
All DBs
Position
580882..584559
Genome browser
AA seq
1225 aa
AA seq
DB search
MTNIPLKPQNETFTDKQWQAVFDTGDNLLVSASAGSGKTTVLVRRVIEKLKNGSNIDELL
IVTFTEAAAREMKERIQNALQDAINKESEQQRRNHFVKQLTLLPRAQISTLHAFCLTVIR
RFYFLIDLDPVFRMLTDDTERLLLKEEVWEELRDDYFEAYDEEFYRLAENFSNDRSDDGL
TNLIMSLYDFAKANPDPTTWLNQLSQSYDTTQGLAGNQMYQTQVKPLILANLQTAIGQLQ
AALEMAQSSELMEKAELVLTSDLEQANLLWNYVNEENVQQAYEQLSNFDFKRYPTYKKED
AKELSNDFIKPRRDSAKELIKETESFFAQSPEKMLALMDQAQPLVEKMGEVTLAFIENYQ
KRKQAKGVLDFNDLEHFALDILQGDGQGSEASSYYRDRFEEVLVDEYQDTNRLQEAILFW
VRQPEPTQGNLFMVGDVKQSIYAFRLADPTLFVDKYLAFAQKEGGRRIVLAENFRSRKEV
LQFTNLVFEQLMDETVGQIPYDEAAQLVAGFPAFPDSEEFSTELLLYEKEVEDDPTVVDD
KTEGELYLVALKIKELVENRFMIYDKNQKEMRPITYDDIVLLTPTRKNNLVIMDVFKQFQ
IPLEVNDAQNYFQATEVQIMISLLEVIDNPYQDIPFVAVLRSPIVGLNEEELAMIRLAQK
DSYYYEAFLAYLSEDDELAARLHTFNEQLTSWRELARRRSISELIWSIYQETAYLDYVIG
LASGRQRYANLVALAHRAETYEKSSFRGLYQFIRFIEKMQEKDKDLAEPLALSQENAVKV
MTIHASKGLEFPVVFLLDMTKQFNYSDFTARFIFEERLGAGIQYIDEEQVRYDTLPYQAI
KQQRIQKMLSEEMRKLYVALTRAEQKLYLVGSYKTKEEALKNWQKALDQENLVLDPALRL
KGKGNLMDWVGMTLMRHPDMQKVFSEATDSKKVVDHPTHFEIHWSNQTQLEETIQKYQTS
VNDIQSLNPPEKAEVSELQQRLDFIYPMEKSTKTTSYQSVSEMKRLYNDPDDQQLNKISW
QSTLEQQKAQHYRYVTEELAKPKFMQQEQIDPTVIGSATHSLLQLLPLTSAPTQTSIQQK
LEMLVANHQVESQVAEKMDLSAVLWFFQTDLGQKILAEPDRVRREQPFSMLKDARDVFLD
FDEADAELLIHGIVDGYIEYEDHVILYDFKTDHVYNANSKQQVLDKYMGQLRLYREALAQ
ALNKPVTHTFLVLLNSKEIIEMFTT
NT seq
3678 nt
NT seq
+upstream
nt +downstream
nt
atgactaatattcctttaaaaccccaaaatgaaacatttaccgataaacaatggcaagcg
gtctttgataccggtgataatttacttgtatcggcatcagcaggatctgggaaaacaacg
gtcctagtccgtcgagtgattgaaaaattaaagaacggcagcaacatcgacgaactattg
attgttacttttaccgaagcagcagcacgtgaaatgaaagaacgaattcaaaatgcgctg
caagatgctattaataaagaaagcgagcaacaacggcgcaatcattttgttaagcaatta
acgcttttacctagagcacagatttctacgctgcacgcattttgtctaactgtaatccga
cgtttttattttttaattgacttggatcctgtatttcgcatgctgactgatgataccgaa
agattattgttaaaagaagaggtttgggaagaattacgggatgactactttgaggcttat
gatgaagaattttatcgtttagctgagaatttttccaatgatcgctctgatgatggctta
acgaatttaatcatgtctttgtatgattttgctaaagcaaatcctgatccgactacttgg
ctaaatcaacttagccagagctacgataccacacaaggtttagctggaaatcaaatgtat
caaacgcaagtcaaaccattgattttagctaacttgcaaacggctatcggacagctgcaa
gctgctttagagatggcacaaagttccgaattaatggaaaaagcagaattggtgctaaca
agtgaccttgaacaagccaatcttttatggaattatgtcaatgaggaaaatgtacagcag
gcttacgaacaattgtcaaactttgattttaagcgatatcccacttataaaaaagaagac
gccaaagaattatcgaacgattttatcaaaccacgtcgtgatagcgctaaagagcttatt
aaagaaacggaatcattttttgctcaatcgcctgaaaaaatgcttgccttaatggatcaa
gcacaaccattagtcgaaaaaatgggagaagtcaccttagcttttattgaaaattatcaa
aaacgtaaacaagctaaaggagtactagattttaatgaccttgaacattttgctttggat
attttacaaggcgatggtcagggaagcgaggcttcgtcctactatcgtgaccgttttgaa
gaagtcttagtagatgaataccaagataccaaccgtttgcaagaagcaattctcttttgg
gtacgccaacctgaaccaacacaaggcaacttgtttatggtaggcgacgtgaaacaatcg
atttatgcttttcggttggcagacccgactttatttgttgataagtacctagcctttgct
caaaaagagggaggacggcgaattgttttagccgaaaattttcgttctagaaaagaagtg
ttacagtttacaaatctagtttttgagcaattgatggatgaaacggtaggacagattcct
tatgatgaagcagcgcaattggtagctggcttcccagcttttcctgacagcgaagaattt
agtacagaattacttttgtatgaaaaagaggtcgaagatgatccaactgttgtggatgat
aaaactgagggagaattgtacctggttgctttaaaaatcaaagaattagtagaaaatcgg
tttatgatctatgataaaaaccaaaaagaaatgcgcccaatcacctatgatgatattgtg
ttgttgacgccgacgcgtaaaaataacttggtgatcatggatgtatttaagcaatttcaa
atccctttggaagtcaatgatgcacaaaattattttcaagcaaccgaagtacaaattatg
atttctttgctagaagttattgacaatccttaccaagacattccttttgtggcagttttg
cggtcccccatagtggggctaaatgaagaagaactggctatgattcgcttagcgcaaaaa
gacagttattactatgaagcttttttagcttatctatccgaagatgatgaacttgctgca
cgcttgcatacctttaatgagcaactaacatcttggcgcgagctggctcgtaggcgttca
attagtgagctgatttggtcaatctaccaagaaactgcttatttggattacgtcatcggt
ttagcatcgggcagacaacgatatgctaatttagtagccctagcacatcgagctgagact
tatgaaaagagtagttttagagggttgtatcaatttattcgttttatagaaaaaatgcag
gaaaaggataaagatttagcagaaccacttgctttatcgcaagaaaatgccgtaaaagtt
atgacaattcatgctagtaaagggctagaattccccgtggtttttcttttggatatgact
aaacagtttaactatagtgattttactgcacgatttatttttgaggaacgcttaggtgct
ggtattcaatatattgacgaagaacaagtgcgctatgatactttaccctatcaagcgatt
aaacaacaacgaattcaaaagatgttatcagaagaaatgcgcaagttatatgttgctttg
actcgggcagaacaaaagctttatttggttggttcgtataaaaccaaagaagaggcgcta
aaaaattggcaaaaggccttagatcaagaaaatttagtgctagatcccgctttgcgctta
aaaggcaaaggaaatttaatggattgggtcggtatgacgttgatgcgtcacccagatatg
caaaaagttttctcagaagcaactgatagcaaaaaagtggttgatcaccccacacatttt
gaaattcattggagtaatcaaacacagttggaagaaactatacaaaaatatcaaacgtcg
gtaaatgatattcagtcactgaatcctccagaaaaagctgaagtaagtgagttgcaacaa
cgtttagattttatctatccgatggaaaaatcaaccaagactacaagctatcagtcggtt
tctgagatgaaacgtttgtataatgaccctgatgatcagcaacttaataaaatatcctgg
caaagtactttagaacagcaaaaagcccaacactatcgttatgtgactgaagaattggca
aaacctaaatttatgcaacaagaacagatcgacccgacagtcataggcagtgcaacgcac
agcttgttacagttgcttccattaacatcggcacctacgcagacgagtatccaacaaaaa
ttggaaatgctagtggcaaatcatcaagtggaaagccaagtagcggagaaaatggattta
tctgctgtcttatggttctttcaaacagacttaggtcaaaaaatcctagctgaacctgac
cgtgttcgtagagaacaaccgttttcgatgttaaaagatgcgcgagacgtatttttagat
tttgatgaagcagatgctgaattactaatccatgggattgtagatgggtatattgaatat
gaagaccacgttattttatatgatttcaagacagatcatgtgtataatgcaaatagtaaa
cagcaagtattagacaaatatatgggccaattgcggctgtaccgcgaggctttagctcaa
gccttaaataaacctgttactcatactttcttagtgcttttaaatagtaaagaaatcatt
gagatgtttactacctga
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