Tetragenococcus koreensis: C7K43_02910
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Entry
C7K43_02910 CDS
T05710
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
tkr
Tetragenococcus koreensis
Pathway
tkr03410
Base excision repair
tkr03430
Mismatch repair
tkr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tkr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
C7K43_02910 (recJ)
03430 Mismatch repair
C7K43_02910 (recJ)
03440 Homologous recombination
C7K43_02910 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tkr03400
]
C7K43_02910 (recJ)
DNA repair and recombination proteins [BR:
tkr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
C7K43_02910 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
C7K43_02910 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
C7K43_02910 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ssDNA-exonuc_C
RecJ_OB
DHH
DHHA1
Motif
Other DBs
NCBI-ProteinID:
AYW44971
UniProt:
A0AAN4RIP3
LinkDB
All DBs
Position
608131..610428
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AA seq
765 aa
AA seq
DB search
MKQANYNWQLPQAAELPTEFTDQLKKEDVPDFLGQLLWQRGVKTKQAVEAFFHPTLDQLH
DPFLLFEMEKAVIRVQKAMENEEKILIYGDYDADGITSTSVMKETLELLGADVDYYLPNR
FTDGYGPNLEVYKEKIAAGAQLIITVDNGVAGNEAIDFANSQGVDVIVTDHHELPQVLPN
AYAIIHPRHPEGKYPFGELAGVGVAFKFACALLDEVPPDFLDLVAIGTVADMVSLTDENR
ALVIFGLQALKQTQRIGILELLQISQILPEEVDESTIGFAIAPRLNALGRLEDPNEAVEL
LTTFDQDRARQLSAQLDQINTQRKTLTQEITEEAMRQVLPDKKIQIITGENWHEGVLGIV
AGKIAQKVGQPTIVLTQTQDGILKGSGRSVDTVNLFKLLDEARDLMVSFGGHHAAVGLSI
QSENLPFLVEKVNEVIKIKQVQPMNNLAIDAILSLSDVSLQHIEAMQSLAPFGMDNPLPH
ILFKDCSVVNARTVGADGKHLKLSVKDRSEANVEGIGFGFGPDILEFQSESIDIVAQLSI
NEWNHKRIPQIMLQDYRVDQLQVFDYRSKKYQQNLAFVDPTLFVSFSEKETKKAENKVDH
PVVTYKDPQSFLSVIDNTNFQQLVLINCPIQLEDAKEAIKAAQVSRIFFLCSAKDDAYLD
GMGTREQYAKLFHFIAKQQQIDVRYKLPLIAQHLNIPEKLLFFMIQVFFDLEFVTITDGI
MDKVQDPESHALTESQTYQERLDKIKTEEFLLLSDLPTLKSWLSI
NT seq
2298 nt
NT seq
+upstream
nt +downstream
nt
ttgaaacaagcgaattataattggcaactcccgcaggctgcggaattgcccacggaattt
accgatcaattaaaaaaagaagacgttccagattttctaggtcagctgctttggcaacgt
ggtgttaaaaccaaacaagcagttgaagctttttttcatccaacactagatcagttacat
gatccttttctcttgtttgaaatggaaaaagctgttatacgtgtacaaaaagcaatggaa
aacgaagaaaagattctgatttatggtgattacgacgctgatggtattactagtacatcg
gttatgaaagaaacgctggagcttttaggtgcagatgtggattattacctacctaatcga
tttacagatggatatgggcccaatttagaagtgtataaagaaaaaatagctgctggagca
caattaatcattacagtcgataatggtgtagcaggaaatgaagccatcgattttgctaat
agccaaggggtagacgtgattgttactgatcatcatgaattgccgcaagtattacccaat
gcttatgcaattattcatccgcgtcatccagaaggaaaatatccatttggcgaattagcg
ggtgtaggtgtggcttttaaatttgcctgcgccttacttgatgaagttcctcccgatttt
ttagatttagtagcgattggcactgttgctgatatggtttcactaacggatgagaatcgt
gcattagttatttttggtttacaagctttaaagcaaactcagcgtatcggtattcttgaa
ttattacagattagccaaatactgccagaagaagtcgatgagtcaacgatcggttttgcg
attgctcctcggttaaatgctttaggtcgtttagaagatcccaatgaagcagtcgaattg
ctgactacttttgatcaagatcgagcccgtcagttatcggcacagctcgatcaaattaac
acgcaaagaaaaacgcttactcaagaaattaccgaagaggcgatgcgtcaagtcttacct
gataaaaagattcaaattattacaggtgaaaattggcacgaaggtgtattagggatcgtt
gctggtaaaatcgcacaaaaagtcggacaaccgacgattgttttaactcagacacaggat
ggtattttaaaaggttcaggtcgcagtgttgatacagtgaatctatttaaacttttagat
gaagcaagagatttaatggtcagctttgggggccatcatgctgctgttggacttagtata
caaagtgaaaatttaccctttctagtagaaaaagtaaatgaagtcataaaaattaagcaa
gttcaaccgatgaataatttagcgattgacgcgatattaagcttgtcagacgttagttta
cagcatattgaagcaatgcaatctttggcgccttttggtatggataatccattgccacat
attttatttaaagattgttcggtggtaaacgctcggactgttggagcagatggcaaacac
ttgaagctttcagtaaaagatcgttcggaagcaaacgtggaaggcatcggttttggtttt
ggcccagatattttagaatttcaaagtgaatcgatcgatattgtggcacaattgtcaatt
aacgaatggaatcataaacggatcccgcaaattatgttacaagattatcgtgtcgatcag
ctgcaagtttttgattaccgatcaaaaaaatatcaacaaaatttagcttttgtagacccc
actttatttgtcagtttttcggaaaaagaaacgaaaaaggcggaaaataaggtggaccat
ccggttgtaacttataaagatcctcaaagttttctttcagtaatagacaataccaacttt
caacagttagtacttattaattgtcccatacagctagaagacgctaaagaagcaattaaa
gcagcgcaagtttcgcgaatttttttcctatgttcagctaaagacgatgcttatctagat
gggatgggtaccagagaacagtatgcgaaattgtttcattttattgctaaacagcagcaa
atcgatgtaagatataaattgccgcttattgcacaacacttaaatattccggaaaaacta
ttgttttttatgatccaagtgttttttgacttagaatttgttacaataacagacgggatt
atggataaggtacaagacccagaatctcatgcactgactgaaagtcagacctatcaagag
cgtctggataaaatcaaaacagaagaatttttattattaagtgatttgccgactttaaaa
agttggttatcaatataa
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