Tetragenococcus koreensis: C7K43_04135
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Entry
C7K43_04135 CDS
T05710
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
tkr
Tetragenococcus koreensis
Brite
KEGG Orthology (KO) [BR:
tkr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tkr03032
]
C7K43_04135
03400 DNA repair and recombination proteins [BR:
tkr03400
]
C7K43_04135
Enzymes [BR:
tkr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
C7K43_04135
DNA replication proteins [BR:
tkr03032
]
Prokaryotic type
DNA Topoisomerases
C7K43_04135
DNA repair and recombination proteins [BR:
tkr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
C7K43_04135
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Zn_ribbon_RPB9
DUF2996
Toprim_4
T_hemolysin
DUF4825
Motif
Other DBs
NCBI-ProteinID:
AYW45192
LinkDB
All DBs
Position
complement(880722..882800)
Genome browser
AA seq
692 aa
AA seq
DB search
MAYKYLVIVESPAKAKTIEKYLGRNYKVVASVGHIRDLPKSKMGIDVENNYEPYYITIRG
KGDVTKDLKKHAKKAEKVYLASDPDREGEAIAWHLSYILGLDLHDKNRVVFNEITKDAVK
EAFKEPRSIDLDLVDAQQARRILDRLVGYSISPMLWRKVKKGLSAGRVQSVALKMIIDRE
KEIRNFTPEEYWSIDGNFKKGRKKFKANFWGVDGKKKKLPNEEAVKEVTSRISGKDYDVT
KVEKKERKRNPAAPFTTSNLQQEAARKLNFRTGKTMMIAQQLYEGISLGKGGTTGLITYM
RTDSKRIADSAKQEVTDFIEQTYGKSYAAHSNKKLKNAQGAQDAHEAIRPTSALRTPESI
EKYLDKDQMKLYRLIWSRFVASQMKPAILDTVKATLNQNGVIFVANGSKVKFKGFMEVYV
EGRDDGKKDKENILPELASGDVVQSEDITPNQHFTQPPARFSEATLIRTLEENGVGRPST
YAPTLQTIQKRYYVKLAQKRFEPTELGEIVNNLIEDFFPEIVDVSFTAGMEEDLDHIEEG
KEEWVKVIDRFYQPFEKELDTAEEKMEKIQIKDEPAGFDCDVCGHPMVIKLGRYGKFYAC
SNFPECRNTKPIVKEIGVTCPKCQKGQVIERKSKKNRIFYGCDRYPECDFISWDKPVGRA
CPKCDHYLVEKKKKGGKQVVCSNCDYKEDVQK
NT seq
2079 nt
NT seq
+upstream
nt +downstream
nt
atggcttataaatatttggtgatcgtggaatcgccagcgaaagcgaaaacgatcgaaaaa
tatcttggtcgtaattataaagttgtagccagtgttggccacattcgtgatttaccaaaa
agtaaaatgggaattgatgttgaaaataattatgaaccatattatattactattcgcgga
aaaggcgatgtgaccaaagatctaaaaaaacatgctaaaaaagcagaaaaagtttatctt
gctagtgacccggatagagaaggggaagcaattgcttggcatttatcttatattttagga
ttagacctgcatgataaaaatcgagtggtttttaatgaaattactaaagatgctgtcaaa
gaagcttttaaagagcctagatcaattgatctagacttagtggatgctcaacaagcgcgg
cggatattggaccgtttagtgggttattccattagtcctatgctttggcgtaaagtgaaa
aaagggctaagcgctgggcgtgttcaatcggttgcacttaaaatgattattgaccgagaa
aaagaaattcgtaattttactccagaagaatattggagtattgatggaaacttcaaaaaa
ggacgcaaaaaatttaaagcgaatttttggggcgttgacggtaaaaagaaaaaattgcct
aacgaagaagcggtcaaagaagttacctcacgtatatcaggtaaagattacgatgtaaca
aaagttgagaaaaaagaacgtaaaagaaatcccgcagctccttttaccactagtaatttg
caacaagaagctgcacgtaaattaaattttcgtactgggaaaacgatgatgattgctcaa
caattgtatgaaggaatttcgttaggaaaaggcggcacaactgggctaattacctatatg
cgtaccgactccaaacgtattgctgacagtgctaaacaagaagtgactgattttattgaa
caaacctatggaaaaagttacgctgcacacagtaataaaaaattaaaaaacgcgcaaggc
gcacaagatgcccatgaagcaattcgtcctactagtgcgctgcgaactccagaatcgatt
gaaaaatatctagataaagatcaaatgaagttgtatcggttaatttggtctcgttttgtt
gctagtcaaatgaaaccagcgattcttgatactgtaaaggctacgctaaaccaaaacggt
gttatctttgtggcaaatggatcaaaagttaagtttaaaggatttatggaagtgtacgtt
gaaggacgcgatgatggtaaaaaggacaaagaaaatattttgccagaattagcttccggt
gatgttgtacaatcagaagatatcacacctaaccaacactttactcaaccaccggctcgt
tttagtgaagcaacattgattcggactttggaggaaaatggtgtaggtcgcccgtcaact
tatgctcctactctacagacgatccaaaaacgttattatgtcaaacttgcgcaaaagcgt
tttgaaccaactgaattgggtgagattgtcaacaatctgattgaagatttctttcctgaa
attgtcgacgtttcctttactgctgggatggaagaagatctagaccatattgaagaaggc
aaagaagaatgggtcaaagttatcgatcgtttttaccagccttttgaaaaggaattggat
actgctgaagaaaaaatggaaaagatccaaatcaaggatgagccagccggttttgattgt
gatgtttgtggccacccgatggttattaaattagggcgctacgggaaattttacgcctgc
agcaatttccctgaatgtcgtaacaccaaaccgattgttaaagaaattggtgttacttgt
cctaaatgtcaaaaaggacaagtgatcgaaagaaaatcgaaaaagaatcgcattttttat
ggttgcgatcgttatccagagtgtgactttatttcatgggataaaccagtaggtcgcgct
tgtccaaaatgtgatcattacttggtagagaaaaagaaaaaaggtggcaaacaagtcgtt
tgctctaattgcgattataaggaagatgtgcaaaaataa
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