Tetragenococcus koreensis: C7K43_11430
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Entry
C7K43_11430 CDS
T05710
Name
(GenBank) ATP-dependent helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
tkr
Tetragenococcus koreensis
Pathway
tkr03420
Nucleotide excision repair
tkr03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
tkr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
C7K43_11430
03430 Mismatch repair
C7K43_11430
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tkr03400
]
C7K43_11430
Enzymes [BR:
tkr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
C7K43_11430
DNA repair and recombination proteins [BR:
tkr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
C7K43_11430
MMR (mismatch excision repair)
Other MMR factors
C7K43_11430
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
Viral_helicase1
AAA_30
Pox_A32
SLFN-g3_helicase
ResIII
AAA_22
T2SSE
NPHP3_N
AAA_7
AAA_11
IstB_IS21
DEAD
Motif
Other DBs
NCBI-ProteinID:
AYW46480
LinkDB
All DBs
Position
2383072..2384505
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AA seq
477 aa
AA seq
DB search
MAAKEIELEVERALECIECEKNFILTGGAGSGKTYSLISLIEEIGNKYPLSSIVCITYTN
NAVAEIRDRITNSNLRVSTIHEFVWSIISEFQREIKETLIELVNEEEKGKFKQPKELDDG
QKIGVDYFNDSNIVYGGYYDLKKHEVSSINHDQVLILAEKMFEKYSKLCDILKDIAKFIF
VDEYQDTSPLIKEILLKHLKQSSKKNTVGFFGDSMQAIYDGSVGAITDGSLVRIDKKQNR
RNPQTVIDLANLLREDEIEQVPSDDLNAPNMDNGIILQGSIKFVYADSIDGVNSLRNLPY
FKDWNFYDSKQTKELWLVQKANAKRAGFPKLFELYNSDKIIELIDRTQKKVIHKGIETSN
RTFESVTEEADVWVKKRGNLLENIRADSTYSSVFERIKANDWDKVSNYRVNKESLLSYKF
NGLMGKYESRPQRDKILCHLDSIYELMELYENGVYNDFLRKTEKNIITQVSHTKSGR
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
gtggctgcaaaagaaatagaactggaagttgaacgagctctcgaatgtatcgaatgcgag
aaaaattttattttgaccggaggagcaggtagtggaaaaacttattcactgatttctctt
atagaagaaattggaaataaatatccgctaagttcaattgtttgtattacttatacaaat
aatgctgtagcagaaattagagatcgtatcacaaacagtaatttacgagtctccacaata
catgagttcgtttggtcaataatttctgaatttcaacgagaaataaaagaaactctgata
gaattggttaatgaagaagaaaagggaaaatttaaacaacctaaagaacttgatgatgga
caaaagataggtgtagattattttaatgatagtaacatcgtatacggcggttattacgat
ttaaaaaaacatgaagtaagtagtattaatcatgatcaagttttaatacttgcagaaaaa
atgttcgaaaaatactcgaagctttgcgatattttgaaagatatagcaaaattcatcttc
gttgatgaatatcaagatacgagcccactaataaaagaaattttgcttaaacacttgaaa
caaagttccaaaaagaacactgtaggtttttttggtgattcaatgcaagcaatttatgac
ggtagcgtgggagcaattactgatggtagtcttgtacgtatagataagaagcagaataga
aggaatccacaaactgttattgatttagcaaatctgttaagagaagatgagattgaacag
gtaccttcagacgatttaaatgctcctaatatggacaacggtataattttacaaggaagc
attaaatttgtatatgcagatagtattgatggagttaactctttgcgtaatttaccctat
tttaaagattggaatttttacgatagtaaacagactaaagaattatggttagttcaaaaa
gcaaatgcaaaaagagcaggctttccaaagttatttgaattatataattctgataagatt
attgaactgatagatagaacacagaaaaaagtaatacataaaggtattgaaacaagtaat
agaacttttgaatctgtgacagaggaggcggatgtttgggttaaaaaaagaggaaactta
ttagaaaatataagagcagactcaacttatagttcagtttttgagcggataaaggctaat
gattgggacaaagtgagtaactatagagtgaataaagaatctttgttgtcttataaattt
aatggtttaatggggaaatatgaatctaggcctcaacgagataaaatattgtgtcatttg
gattctatttatgagcttatggaactttatgaaaatggggtttataatgattttttaaga
aaaacggaaaaaaatataataactcaagtttcgcacaccaaatctgggagataa
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