Tessaracoccus lapidicaptus: TLA_TLA_00287
Help
Entry
TLA_TLA_00287 CDS
T06975
Symbol
rho
Name
(GenBank) Transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
tla
Tessaracoccus lapidicaptus
Pathway
tla03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tla00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
TLA_TLA_00287 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tla03021
]
TLA_TLA_00287 (rho)
03019 Messenger RNA biogenesis [BR:
tla03019
]
TLA_TLA_00287 (rho)
Transcription machinery [BR:
tla03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
TLA_TLA_00287 (rho)
Messenger RNA biogenesis [BR:
tla03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
TLA_TLA_00287 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
NACHT
Spore_III_AA
AAA
ResIII
DHquinase_II
Motif
Other DBs
NCBI-ProteinID:
VEP38826
LinkDB
All DBs
Position
1:complement(291819..293642)
Genome browser
AA seq
607 aa
AA seq
DB search
MSESVDLSGMKLVELKSVAARLGIKGASAMRKGDLVSAIQSAGGGAPAARAPRPEREQAA
PQETLVDAGAEPQRPPRSRRAASRPAGEPASPAGEAAPAAQEQRSEEPRRQEEPRQDRGD
GEPSGRNRRRRNRDRAPQGETTIPQQDVIDEVGELLEAAKGGGRAPAAAASAPPAPASVT
IEPVGYDDDQGGSRRSRRRRNRERQTNRRPTRGSQGGMERMEAEPTVGEGDVLVQISGIV
DIQDNYAFVRTSGYLPGPNDAYLSMSTVRRYGLRRGDVITGAIRAQREGERKEKFNPLVR
LDTVNGDDPEKAKGRPEFAKLTPLYPQERLRLETVQNNITGRIIDLVSPIGKGQRGLIVS
PPKAGKTMIMQAIANAIAANNPEVHLMVVLVDERPEEVTDFQRTVSGEVIASTFDRPAED
HTMVSELAIERAKRLVELGHDVVVLLDGITRLGRAYNLAAPASGRILSGGVDSAALYPPK
KFFGAARNIEDGGSLTILATALIETGSKMDEVIFEEFKGTGNMELRLRRELADKRIFPAI
DVDASGTRREDLLLGRDELNIIWKLRRALSGLDDQQALETLKSRMAKTQSNHEFLLSVLK
TTPAAEG
NT seq
1824 nt
NT seq
+upstream
nt +downstream
nt
ttgagcgaatccgttgacctgtccggaatgaagctggtcgaactcaagtccgtcgcagcc
agactgggcatcaagggcgcatccgccatgcgcaagggtgacctggtctccgccatccag
tccgccgggggcggcgcccccgccgcccgagcgccccgccccgagcgggagcaggcggcc
ccccaggagacgctcgtcgacgccggggccgagccccagcgccctccgcgcagccgtcgc
gccgcgtcgcgtccggctggggaaccggcctcccccgcgggggaggccgcgcccgcggcc
caggagcagcgctccgaggagccgcgccgccaggaagagccgcgccaggaccgtggcgac
ggcgagccgagcggccgcaaccgccgccgccgtaaccgcgaccgcgccccccagggcgag
accaccatcccgcagcaggacgtcatcgacgaggtgggcgaactcctcgaagcggccaag
ggcggcggccgcgcacccgctgccgcggcctcagcgccgccggcccccgcgtcggtcacc
atcgagcccgtgggctacgacgacgatcagggcggctcgcgccgcagccgtcgacgccgt
aaccgcgagcggcagaccaaccggcgccccacccggggaagccaggggggcatggagcgc
atggaggccgagcccaccgtcggcgagggcgacgtgctcgtccagatctccggcatcgtc
gacatccaggacaactatgcgttcgtccgcacctccgggtacctgcccggccccaacgat
gcctacctgtcgatgtcgacggtgcggcgctacggtctgcgccgcggcgacgtcatcacc
ggcgcgatccgcgcgcagcgtgagggcgagcgcaaggagaagttcaacccgctggtgcgc
ctcgacacggtcaacggcgacgatccggagaaggccaagggccgccccgagttcgccaag
ctcaccccgctctatccgcaggagcggctgcgcctcgagaccgtgcagaacaacatcacc
ggccggatcatcgacctggtctcgcccatcggcaagggccagcgcggcctgatcgtgtcg
ccgcccaaggcgggcaagaccatgatcatgcaggccatcgcgaacgcgatcgccgcgaac
aaccccgaggtccacctcatggtggtgctcgtggacgagcgtcccgaggaggtcaccgac
ttccagcgcacagtctccggcgaggtcatcgcctcgacgttcgaccgcccggccgaggac
cacaccatggtctccgagctcgcgatcgagcgcgccaagcgcctggtcgagctcggccac
gacgtcgtcgtgctgctcgacggcatcacgcgcctcggccgcgcctataacctggcggcg
ccggcctcgggccgcatcctgtccggtggtgtcgactcggcggcgctgtacccgccgaag
aagttcttcggtgccgcccgcaacatcgaagacggtggctcgctcaccatcctggccacc
gcgctcatcgagacgggctccaagatggacgaggtcatcttcgaggagttcaagggcacg
ggcaacatggagctgcgcctgcgccgcgagctggccgacaagcgcatcttccccgcgatc
gacgtcgacgcctcgggcacccggcgcgaggacctgctgctgggtcgcgacgagctcaac
atcatctggaagctgcgccgggccctgtccggactcgacgaccagcaggcgctcgagacc
ctgaagtcgcggatggccaagacgcagagcaaccacgagttcctgctcagcgtcctgaag
accacccccgcggccgagggctga
DBGET
integrated database retrieval system
