Tessaracoccus lapidicaptus: TLA_TLA_00362
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Entry
TLA_TLA_00362 CDS
T06975
Symbol
hrdB
Name
(GenBank) RNA polymerase principal sigma factor HrdB
KO
K03086
RNA polymerase primary sigma factor
Organism
tla
Tessaracoccus lapidicaptus
Brite
KEGG Orthology (KO) [BR:
tla00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
TLA_TLA_00362 (hrdB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tla03021
]
TLA_TLA_00362 (hrdB)
Transcription machinery [BR:
tla03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
TLA_TLA_00362 (hrdB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
AphA_like
PqqF_C_3
Motif
Other DBs
NCBI-ProteinID:
VEP38902
LinkDB
All DBs
Position
1:complement(375140..376444)
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AA seq
434 aa
AA seq
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MTQDAEGTGRPTRSRRPAATGKPAAKATTTAAAKAPAAPRASRGRGKAAKADVPTIADAT
TGEVEVQFERDGEDVVLTVGGKKRSLDEVDDAQFDEASAAPLAKELVEEEGFALSDSDDA
DEPEQQVVSAGATADPVKDYLKQIGKVALLNAVEEVELAKRIEAGLFAEERLNSVDEPVS
PEDLEDLEWIAEDGRRAKNHLLEANLRLVVSLAKRYTGRGMLFLDLIQEGNLGLIRAVEK
FDYTKGYKFSTYATWWIKQAITRAMADQARTIRIPVHMVEVINKLARVQRQMLQDLGREP
TPEELAVELDMTPEKVVEVQKYGREPISLHTPLGEDGDSEFGDLIEDSEAVVPADAVNFT
LLQEQLNDVLDTLSEREAGVVSMRFGLTDGQPKTLDEIGKVYGVTRERIRQIESKTMSKL
RHPSRSQVLRDYLD
NT seq
1305 nt
NT seq
+upstream
nt +downstream
nt
gtgacccaggacgctgaaggaacgggcaggcccacccgcagccgccggcccgccgccacc
ggaaagccggcggcgaaggccacgacaacggccgcggcgaaggccccggccgcgccccgg
gcatcgaggggccgcggcaaggcggccaaggcggatgtcccgaccatcgcggatgcgacc
accggggaggtggaggtgcagttcgaacgtgacggtgaggacgtggtcctcacggtgggc
ggcaagaaaaggtccctggacgaggtggacgacgcccagttcgacgaggccagcgctgcc
ccgctcgcgaaggaactcgtcgaggaggagggcttcgcgctctcggactccgacgacgcc
gacgagcccgaacagcaggtcgtctccgccggtgccaccgcggaccccgtcaaggactac
ctcaagcagatcggcaaggtcgccctgctcaacgccgtcgaggaggtcgagctcgcgaag
cgcatcgaggcgggcctgttcgcggaagagcggctgaactctgtcgacgagccggtgtcg
cccgaggaccttgaggacctcgagtggatcgccgaggacggtcgccgcgcgaagaaccac
ctgctcgaggcgaacctgcgcctcgtggtgtcgctcgccaagcgctacacggggcgcggc
atgctgttcctcgacctcatccaggaaggcaacctgggcctcatccgcgcggtggagaag
ttcgactacaccaagggctacaagttctccacctacgcgacgtggtggatcaagcaggcc
atcacccgcgccatggcggaccaggcgcgcaccatccgcatccccgtgcacatggtcgag
gtcatcaacaagctcgcccgggtccagcgccagatgctgcaggaccttggccgggaacct
acccccgaggagctggcggtcgagctcgacatgacgccggagaaggtcgtcgaggtccag
aagtacggccgcgaacccatctcgctgcacaccccgctgggtgaggacggtgactccgag
ttcggcgacctgatcgaggactccgaggccgtcgtgcccgcggacgccgtgaacttcacg
ctcctgcaggagcagctcaatgacgtcctcgacacgctgagcgagcgcgaggccggggtg
gtgagcatgaggttcgggctcaccgacggccagccgaagaccctcgacgagatcgggaag
gtctacggcgtcacccgcgagcggatccggcagatcgagtccaagacgatgtcgaagctg
cgccacccgtcgcgctcgcaggtgctgcgcgactacctcgactag
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