Tessaracoccus lapidicaptus: TLA_TLA_00664
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Entry
TLA_TLA_00664 CDS
T06975
Symbol
fpg1
Name
(GenBank) Formamidopyrimidine-DNA glycosylase 1
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
tla
Tessaracoccus lapidicaptus
Pathway
tla03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
tla00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
TLA_TLA_00664 (fpg1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tla03400
]
TLA_TLA_00664 (fpg1)
Enzymes [BR:
tla01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
TLA_TLA_00664 (fpg1)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
TLA_TLA_00664 (fpg1)
DNA repair and recombination proteins [BR:
tla03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
TLA_TLA_00664 (fpg1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
CBM_AftD
NFACT_N
Auto_anti-p27
DZR_2
DUF7573
Motif
Other DBs
NCBI-ProteinID:
VEP39244
LinkDB
All DBs
Position
1:complement(680020..680859)
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AA seq
279 aa
AA seq
DB search
MPELPEVEVVRRGLDAHVTGRRILGTSVLHPRPVRAHPVGPDAFAADLTGRRIDAVRRRG
KYLWLALGDDALVIHLGMSGQLRVNAPGDAHARHTRVVVDLDDGTQLRFVDQRMFGGLEL
RPGMAVCPVPHIALDPFDPEFDAAATAAALRRRRTQVKRALLDQTLVSGIGNIYADEALW
RAGVHYAHPTASLTPDQATSVLAAASSVMAEALAEGGTSFDSLYVNVNGESGYFSRSLAV
YGREEQPCTRCGTPIARRAFMNRSSHYCPSCQPVAKELP
NT seq
840 nt
NT seq
+upstream
nt +downstream
nt
gtgcctgaactgccggaggtcgaggtcgtccggcgcggcctcgacgcccacgtcacggga
cgtcggatcctcggcacctccgtgctccatccccgccccgtgcgggcgcaccccgtcggc
cccgacgcctttgccgccgacctcaccgggaggcgcatcgacgcggtgcgccgccgcggc
aagtacctgtggctcgcgctcggtgacgacgccctcgtcatccatctggggatgagcggc
cagctccgggtcaacgccccgggcgacgcccacgcccggcacacgcgcgtcgtcgtcgat
ctcgacgacgggacgcagctgcgtttcgtcgaccagcgcatgttcggtggcctggagctg
cggccggggatggcggtgtgcccggtgccgcacatcgctctcgacccgttcgatcccgag
ttcgacgccgccgcgaccgcggccgcgctgcgccgccgccgcacccaggtcaagcgtgcg
ctgctggatcagaccctggtctcgggcatcggcaacatctacgccgacgaggctctgtgg
cgcgccggcgtccactacgcccaccccaccgcctccctcaccccggaccaggccacgtcg
gtcctcgcggccgcctcctccgtcatggccgaggccctcgccgagggcggcacgtccttc
gactcgctctacgtcaacgtcaatggtgagtccgggtacttctcccggtcactggccgtg
tacggtcgcgaggagcagccctgcacgcggtgcggcaccccgatcgcccgccgggcgttc
atgaaccgcagcagccactactgcccgtcctgccagccggtcgcgaaggagctcccatga
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