Tessaracoccus lapidicaptus: TLA_TLA_00673
Help
Entry
TLA_TLA_00673 CDS
T06975
Symbol
rng
Name
(GenBank) Ribonuclease G
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
tla
Tessaracoccus lapidicaptus
Pathway
tla03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tla00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
TLA_TLA_00673 (rng)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tla03019
]
TLA_TLA_00673 (rng)
03009 Ribosome biogenesis [BR:
tla03009
]
TLA_TLA_00673 (rng)
Enzymes [BR:
tla01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
TLA_TLA_00673 (rng)
Messenger RNA biogenesis [BR:
tla03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
TLA_TLA_00673 (rng)
Ribosome biogenesis [BR:
tla03009
]
Prokaryotic type
rRNA processing factors
TLA_TLA_00673 (rng)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
Motif
Other DBs
NCBI-ProteinID:
VEP39254
LinkDB
All DBs
Position
1:complement(687500..690241)
Genome browser
AA seq
913 aa
AA seq
DB search
MLEMSDGTVSPQEQVPATTAPPRRRRAASRPAGPPATPAPSDPTPAAPAAAEPAQAAAPE
ASPAAEPVTAPAAEPVAAEAPAPQEDAAPPTRRRRAATKAAGEPAAPRRRRVKAVEHDGA
SAVEATPESAPEPGQPEEIAPTTAAPAAEAPAAEAPAPTRRRATRRTAPPAEADRPAASQ
EAPASDAAPAEAAPPADADPAAAADRALHQLQDATPAPVVDEAVTTPAPSRRRRATRPTA
PPQAPAETDEDPIAAALRAAEEVAEARRAVLSDPFLTASARDQQLADLAGAIAAGPEDEV
VAEEEQTEDLAGIADQPEAADDVADADDDIDEDVASDEEDVDAEGGETRRRRRRRGGRRR
RRVGSRDESDETGAESDETGAESDADESPESEGAEGESESETETDESGSTRRRRRRRRRG
DAGDASSIDDEVTGIEGSTRMEAKRQRRKESRAAGRRRAPILSEAEFLARRESVDRRLVI
RQAEDYTQLAVVEDNILVEHYVDKASATSLIGNIYIGRVQNVLPSMEAAFIDIGRGRNAV
LYAGEVDWALFGVTGENRKVENVLKSGQSVLVQVTKDPVGAKGARLTGHISLPGRYIVYS
PGGHLSGISRKLPDTERARLRGILATLISDEESVIVRTAAEGVSEEELVRDVNRLKAQWE
VIEKKSKQGSAPQALYSEPDLTLRIVRDLFTEDFAQLVVQGNGGPEDAYDAISAYVGHVA
PHLADRVSRFQADGDDSDVFAQFKIDEQIAKALDRKVYLPSGGSLVIDRTEAMTVIDVNT
GRFTGSGGNLEATVTSNNLEAAEEIVRQLRLRDLGGIIVIDFIDMVLPSNRDLLLRRLVE
CLGRDRTRHQVAEVTSLGLVQLTRKRIGTGLQEAFTEQCEHCHGAGYVRFEEPVDSQSPS
DGGERKPRRRGKK
NT seq
2742 nt
NT seq
+upstream
nt +downstream
nt
atgctcgagatgtccgacggtaccgtcagcccgcaggaacaggtccccgccaccaccgcg
ccgccgcgccgtcgccgcgccgcctcccgcccggccgggccgcccgcaacccccgccccc
tcagatcccactcccgcggcgcctgccgcggccgagcccgcccaggccgccgcgcctgag
gcgtcgcccgccgccgagccggtcaccgcgcccgccgccgagccggtcgccgccgaggcc
cccgcgccccaggaggacgccgcaccgcccacccgacgccgccgggctgccaccaaggcc
gccggcgaacccgcggccccgcgccgccgccgggtcaaggcggtcgagcacgacggtgcg
agcgccgtcgaggccacccccgagtccgcgccggagcccggccagcctgaggagatcgcc
ccgaccactgcggcccccgccgcagaggcccccgcagcagaggcccccgcgcccacccgc
cggcgcgcgacgcgccgcaccgcacctccggcagaggcggaccgccccgcggcctcgcag
gaggcccccgcatccgacgccgcgcccgccgaggccgcgccccccgccgacgcggacccg
gccgccgccgccgaccgcgccctgcatcagctgcaggacgcgacgcccgcgcccgtcgtc
gacgaggccgtcacgacgcccgcgccgtcgcgccgccgccgcgccacccgccccacggcg
ccgccgcaggcgcccgcggagaccgacgaggacccgatcgcagcggccctgcgcgcggcc
gaagaggtcgcagaagcgcggcgggccgtgctgagcgatccgttcctcaccgcctcggca
cgcgaccagcagctcgccgatctggccggagccatcgcggccggcccggaggacgaggtg
gtcgccgaggaggagcagaccgaggacctggccggcatcgccgatcagccagaagccgct
gacgatgtcgcggacgccgacgacgacatcgacgaggacgtggcctccgacgaggaggac
gtggacgccgagggtggcgagacccgtcgccgtcgccgtcgccgcggcggtcgccgtcgc
cgccgcgtcggctcgcgcgacgagtccgacgagacgggcgccgagtccgacgagacgggc
gccgagtccgacgccgacgagagccccgagtcggagggcgccgaaggcgagtccgagtcc
gagaccgagaccgacgagtccggcagcacccgccgtcgccgccgccgtcgccgccgcggt
gacgcgggcgacgcgtcgtccatcgacgacgaggtcaccggcatcgagggttccacccgc
atggaggccaagcggcagcgccgcaaggagtcccgcgccgccgggcgccgccgcgcgccg
atcctcagcgaggccgagttcctcgcccgccgcgagtcggtcgaccgtcgcctggtcatc
cggcaggcggaggactacacgcagctggccgtcgtcgaggacaacatcctcgtcgagcac
tacgtcgacaaggcctccgccacgtcactgatcggcaacatctacatcggccgcgtccag
aacgtcctgccgagcatggaggccgcgttcatcgacatcggccgcggccgcaacgccgtc
ctgtacgccggcgaggtggactgggcgctgttcggggtgaccggcgagaaccgcaaggtc
gagaacgtgctcaagtccggtcagagcgtcctggtgcaggtgaccaaggacccggtcggg
gccaagggcgcccgcctcaccgggcacatctcgctgcccggccgctacatcgtctactcg
ccgggcggccacctctccggcatctcccgcaagctccccgacacggagcgtgcccggctg
cgcggcatcctcgccacgctcatctccgacgaggagtccgtcatcgtgcggaccgcggcg
gagggcgtgagcgaagaggaactggtgcgcgacgtcaaccggctcaaggcccagtgggag
gtcatcgagaagaagtcgaagcagggcagcgccccgcaggcgctctacagtgagccggac
ctgacgctgcgcatcgtccgcgacctcttcaccgaggatttcgcccagctcgtcgtgcag
ggcaacggtggcccggaggacgcctacgacgcgatctcggcctacgtcggccacgtcgcc
ccgcacctggccgaccgcgtgtcccggttccaggctgacggcgacgactccgacgtgttc
gcgcagttcaagatcgacgagcagatcgccaaggcgctggaccggaaggtctacctgccc
tcgggcggatcgctggtgatcgaccgcaccgaggccatgacggtcatcgacgtcaacacc
gggcggttcacgggttccgggggcaacctcgaggcgaccgtgaccagcaacaacctcgaa
gcggcggaggagatcgtccggcagctgcgtctgcgcgacctgggcggcatcatcgtgatc
gacttcatcgacatggtcctgcccagcaaccgcgacctgctgctgcggcgactcgtcgag
tgcctcggccgggaccgcacccgccaccaggtcgccgaggtgaccagcctcgggctcgtc
cagctgacgcgcaagcggatcggcacgggccttcaggaggcgttcaccgaacagtgcgag
cactgccacggcgcgggctacgtccgcttcgaggagccggtggactcgcagtccccgtcc
gacggcggggagcgcaagccccgccgcaggggcaagaagtag
DBGET
integrated database retrieval system
