Tessaracoccus lapidicaptus: TLA_TLA_00836
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Entry
TLA_TLA_00836 CDS
T06975
Symbol
uvrD1
Name
(GenBank) ATP-dependent DNA helicase UvrD1
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
tla
Tessaracoccus lapidicaptus
Pathway
tla03420
Nucleotide excision repair
tla03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
tla00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
TLA_TLA_00836 (uvrD1)
03430 Mismatch repair
TLA_TLA_00836 (uvrD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tla03400
]
TLA_TLA_00836 (uvrD1)
Enzymes [BR:
tla01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
TLA_TLA_00836 (uvrD1)
DNA repair and recombination proteins [BR:
tla03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
TLA_TLA_00836 (uvrD1)
MMR (mismatch excision repair)
Other MMR factors
TLA_TLA_00836 (uvrD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
Viral_helicase1
AAA_11
AAA_22
DEAD
AAA_16
Motif
Other DBs
NCBI-ProteinID:
VEP39437
LinkDB
All DBs
Position
1:complement(863426..865840)
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AA seq
804 aa
AA seq
DB search
MTDSLFPDLFAAFQPDEPPRPAPERDQRRASAKRVSEEELLAGLNPPQREAVLHAGGPVL
VVAGAGSGKTRVLTRRIAHLVSQRDVHPGSILAITFTNKAAAEMRERVVDLVGNRAKLMW
VSTFHSACVRILRQDIDRFGMAKTFSIYDDADSKRLMSLVCRDLELDPKRYPVRAVMNKV
SGFKNELVDYEQALAEASTPPQKVFAEAYADYQSRLHAAHALDFDDLIMTTVHLFQAFPD
VREKYRRRFRHVLVDEYQDTNHAQYALVRELCAGEVEGVVPGSPTVEPAELMVVGDSDQS
IYAFRGATIRNILDFEADFPGARTVVLDQNYRSTQNVLTAANSVISRNQGRREKHLWSEL
GEGELIVGWVADTEMDEAQFVADEIDRLSDAGESQYGDTAVFYRTNAQSRAFEEVFIRVG
MPYKVVGGVRFYERREIRDALAYLRALANPADDVSVRRILNVPKRGIGDRAEAAIATLAS
AERISFFDALQRAAEAPGLASRSVKLIQGFVDVMNLHRAMVAQGRPADEVLTSILKESAY
LPELEASTDPQDETRVENLIELVSVAAEFVAAATTVDLDEAGAESGLVAGMPEPDDSLAA
FLERVALVADSDQVPDRDESKGVVTLMTLHTAKGLEFDTVFLTGMEEGMFPHMRALTDPH
ELEEERRLAYVGITRARKRLYLTRSQVRVTFGAPAYNPQSRFFEEIPPHVLDWRRTGAAT
TTWASSAATRNRQTSASIQSFGTGSGPKFTLPSLTAGDRVLHASFGMGSVVAVHGAGEAT
KVDVDFGSAGTKRLSLKHAPMEKL
NT seq
2415 nt
NT seq
+upstream
nt +downstream
nt
atgactgactccctcttccccgacctgttcgcggccttccagccggacgagccaccccgc
ccggcccccgagcgggatcagcggcgcgcctcggccaagcgcgtctcggaggaggaactc
ctggccgggctgaacccgccgcagcgcgaggcggtgctgcacgccggcggcccggtgctc
gtcgtggccggcgccggttccggcaagacgcgcgtgctcacacgccgaatcgcccacctg
gtgtcgcagcgcgacgtccatcccgggtccatcctcgccatcacgttcaccaacaaggcg
gccgccgagatgcgtgagcgggtcgtggacctggtggggaaccgggccaagctcatgtgg
gtctcgacgttccactcggcgtgcgtgcgcatcctgcgccaggacatcgaccgcttcggc
atggccaagacgttctccatctacgacgacgccgactcgaagcgcctcatgtcgctggtg
tgccgggacctggagctcgaccccaagcgttacccggtgcgggccgtgatgaacaaggtc
agcggcttcaagaacgaactcgtcgactacgaacaggccctcgcggaggcgtcgacgccg
ccgcagaaggtcttcgcggaggcatacgccgactaccagtcccgcctgcacgccgcgcac
gcactggacttcgacgacctcatcatgacgaccgtccacctgttccaggcattcccggac
gtgcgggagaagtaccggcggcgcttccggcacgtgctcgtcgacgagtaccaggacacc
aaccacgcccagtacgccctggtgcgggagctgtgtgcgggcgaggttgagggcgtggtg
ccgggctccccgaccgtggagccggccgagctcatggtcgtcggcgactccgaccagtcg
atctatgccttccgcggggccacgatccgcaacatcctcgacttcgaggccgacttcccg
ggcgcccgcaccgtcgtgctggaccagaactaccgctcgacgcagaacgtgctgaccgcc
gcgaactcggtgatctcccgcaaccagggccggcgcgagaagcacctctggtccgagctt
ggcgagggggagctcatcgtcggctgggtggcggacacggagatggacgaggcccagttc
gtcgccgacgagatcgaccggctgagcgacgccggcgagtcgcagtacggcgacacggcc
gtcttctaccgcaccaacgcgcagtcgcgtgcgttcgaggaggtgttcatccgcgtcggg
atgccctacaaggtggtcggcggcgtgcgcttctacgagcggcgcgagatccgcgacgcg
ctcgcgtacctgcgggcgctcgcgaaccccgccgacgacgtgtccgttcgccgcatcctc
aacgtgcccaagcgtggcatcggggaccgggccgaggcggccatcgcgaccctcgcctcg
gcggaacggatcagcttcttcgatgcgctgcagcgcgccgccgaggcccccgggctggcg
agccggtccgtgaagctcatccagggcttcgtcgatgtcatgaacctgcaccgcgcgatg
gtggcgcagggccgcccggccgacgaggtgctcacctccatcctcaaggagtcggcgtac
ctgccggagttggaggcgtcgaccgacccgcaggacgagacgcgggtggagaacctcatc
gagctggtgtctgtggcggcggagttcgtggcggccgccaccaccgtcgacctcgacgag
gcgggggccgagtctgggctcgtcgccggcatgccggagcccgacgactccctggccgca
ttcctggagcgggtcgcgctggtcgcggactcggaccaggtcccggaccgcgacgagagc
aagggcgtcgtcacgctcatgacgctacacaccgcgaagggtctggagttcgacacggtg
ttcctcaccggcatggaggagggaatgttcccgcacatgcgggcgctcaccgacccccac
gagctggaggaggagcggcggttggcctatgtgggcatcacgcgggcgcgcaagcgcctc
tacctcacccggtcgcaggtgcgggtcacgttcggcgcgccggcgtacaacccgcagtcg
cggttcttcgaggagatccccccgcacgtgctcgactggcgccgcacgggcgccgcgacg
acgacgtgggccagctcggccgccacgcgcaaccggcagacgtcggcgtcgatccagagc
ttcgggaccggcagcgggccgaagttcaccctgccgtcgctgacggcgggggaccgggtg
ctgcacgccagcttcggcatgggcagcgtcgtcgcggtgcatggggcgggcgaggccacg
aaggtggacgtggacttcgggtcagcggggacgaagaggctgagcctcaagcacgccccg
atggagaagctctag
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