Tessaracoccus lapidicaptus: TLA_TLA_01273
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Entry
TLA_TLA_01273 CDS
T06975
Symbol
alkA
Name
(GenBank) putative bifunctional transcriptional activator/DNA repair enzyme AlkA
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
tla
Tessaracoccus lapidicaptus
Pathway
tla03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
tla00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
TLA_TLA_01273 (alkA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tla03000
]
TLA_TLA_01273 (alkA)
03400 DNA repair and recombination proteins [BR:
tla03400
]
TLA_TLA_01273 (alkA)
Enzymes [BR:
tla01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
TLA_TLA_01273 (alkA)
Transcription factors [BR:
tla03000
]
Prokaryotic type
Helix-turn-helix
AraC family
TLA_TLA_01273 (alkA)
DNA repair and recombination proteins [BR:
tla03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
TLA_TLA_01273 (alkA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AlkA_N
Ada_Zn_binding
HTH_18
HTH_AraC
HhH-GPD
HTH_23
UBA_6
Motif
Other DBs
NCBI-ProteinID:
VEP39917
LinkDB
All DBs
Position
1:1339806..1341302
Genome browser
AA seq
498 aa
AA seq
DB search
MLGVMYDEREAWLRAIQSKDARFDGHFVTGVTSTGIYCRPSCPARSPHPRNVRFFVTAAA
AQLAGFRACKRCLPGASPGSPDWDVRGDAVARAVRLIDDGLVDREGVTGLAARLGYSARQ
VQRMLQEGTGAGPLALARTRRAQTARTLLEATELPLTDVAFAAGFASLRSFNATMRAIYD
ATPSELRRTSRGHGPRHDGGLTFVDLTLPVRQPFCACNVFGHLIGTAIDGVETFHDGTYH
RTLRLPGGHGVVSLRPATRGVEARIGVSDIVQLPTALARVRRLLDLDADPVAVDDALADD
PLLAPLVHAHPGRRVPRGVDGDEIAFRILLGQQVSTAAARTHGARLVRAVGTPVETGIPG
LDHLFPTADAVAGAPDEALAYPAARRDTIRRLAGALADGDLDLSVGADRDAARAGLASLR
GIGPWTVEMIAMRGLGDPDAFPATDLGVVRAAEELGVDLTARSAAWRPWRSYATQHLWAL
TPHAVNSIPGHPGCQEQP
NT seq
1497 nt
NT seq
+upstream
nt +downstream
nt
atgctgggtgtcatgtatgacgagcgggaggcctggctgcgcgccatccagtcgaaggac
gcgcgcttcgacggccacttcgtcacaggggtgacgtcgacggggatctattgccgtccc
agttgccccgcccgcagcccccacccccgcaacgtccgcttcttcgtgaccgcagccgcg
gcccagctcgccggcttccgagcctgcaagcgctgtctcccgggcgcctcgccgggctct
cccgactgggacgtccgcggcgacgcggtcgcacgcgcggtgcggctcatcgacgacggc
ctggtcgatcgcgagggcgtcacgggcctggcggcccggctgggttactcggcgcgccag
gtgcagcggatgctgcaggagggcaccggcgccggccctctggcgctcgcccgcacccgg
cgggcccagaccgccaggacgctgctcgaggccacggagctcccgctcaccgacgttgcc
ttcgcggccggtttcgccagcctgcgctccttcaacgccaccatgcgcgcgatctacgac
gccaccccgagtgagcttcgccgcacctcgcgcggccatggaccgaggcacgacggcggg
ctcaccttcgtcgacctgacgctccccgtccggcagcccttctgcgcctgcaacgtgttc
gggcacctcatcggcaccgcgatcgacggcgtggagaccttccacgacggcacgtaccac
cgcaccttgcgcctccccggcggccacggggtcgtctccctccgcccggcgacccgtggg
gtcgaggcccggatcggggtcagcgacatcgtccagctgccgacggccctcgcccgggtg
cggcggctgctcgatctcgacgccgacccggtggccgtcgacgacgcgctcgccgacgac
ccgctcctggcaccgctcgtccacgcacatcccggcagacgggtgcctcgcggggtcgac
ggcgacgagatcgccttccgcattctgctcggccagcaggtgtcgaccgccgcggcccgc
acccatggagcccggctggtcagggccgtcggcacccccgtcgagaccggcataccggga
ctggatcacctctttccgaccgccgacgccgtcgcgggcgcaccggacgaggcgctcgcc
taccccgcggcccgccgcgacacgatccgccgactcgccggggcactggccgacggcgac
ctggacctctcggtcggcgccgaccgggacgccgcgcgcgccggcctcgcctcgctcagg
ggcatcggcccgtggacggtcgagatgatcgcgatgcggggcctgggcgacccggacgcc
ttccccgccacggacctcggcgtggtccgcgcggccgaggaactcggcgtcgacctcacg
gcacggtccgccgcgtggcgaccgtggcgctcctacgccacccagcacctgtgggcgctc
acgccccacgccgtcaactcgatccccggccacccgggatgtcaggagcagccatga
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