Tessaracoccus lapidicaptus: TLA_TLA_01357
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Entry
TLA_TLA_01357 CDS
T06975
Symbol
rapA_2
Name
(GenBank) RNA polymerase-associated protein RapA
Organism
tla
Tessaracoccus lapidicaptus
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Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
SWIM
Motif
Other DBs
NCBI-ProteinID:
VEP40014
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All DBs
Position
1:1429891..1433109
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AA seq
1072 aa
AA seq
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MEPGVEWVRDFPEAELKRLFGAPTFFRGRSYHESGHVKDLHVADGYCRALVTGSGRQIYE
TEAERTGRRLRTHCTCPLGHSCKHVVAIMLEARAHVDAAFGPAPSWEDQLAPLIAGTDAR
ASAGRRLALEFAVAATTYTGTPRITLQPLREGSRTPWVKTGATWGDLIQAYRSPDLNQPQ
RGVLAQIHQLSPDGGYGYGIAPTLDLAGLGPLVWPLLQRAAALGVELLAGEGLRSVRMAD
GAATVTLDLARDDDGAIHARPRASVLPAGAPGRLLLLGSPAHGLGHLDGGTLTLWALAAP
PPDGLDRLIAGGDTVDVPAHDAGRFLSLYYPALARSGAVGSVDGSVEPPDLSPPRLHLTV
RHRPTHVAGLTWGFTYPSPVPGGAPTVLPLDPEPDGPPRDHAAEQRLTDHGARLLGAHPA
LLGTGRQPLLGTAELAGMALATFLIETLPDLRAAGVDVVEVGDAAEYAEADEAPVIHLSA
DDGAERDWFNLHITVTVDGQDVPFDQLFAALAAGDEALLLDSGTWFSLDIPELHDLRRLI
EEARDLVDPDSPGTLRLNPFQAGLWEELVGLGVVARQSRRWREAVERLLPDGDRQDIPVP
AGLRADLRPYQERGFRWLAALWDAGLGGVLADDMGLGKTLQTLALLERARADGQLEGAPV
LVVAPASVVGTWLDEAARFAPDLRVVAITATGRKRGDDVAAAVSGAHVVVTSYTLLRLED
AEYRALTWSGLILDEAQFVKNHRSRTYQAARRLGAPFTLAITGTPLENSLMDLWSMLSLS
APGLFPKPEQFTERYRKPIEVERDRGALETLRRRIRPFVLRRTKREVVQELPEKIEQLQR
IDLTPAHRKVYDRYLQRERQRVLGMLNDLDRNRVAIFRALTMLRQLALDPVLVDAVDDAH
GHGRSAKVTSLVEQITELAAEGHRALVFSSFTGYLALVREALDEAGVGYVYLDGRTRDRP
ARIARFREGDDPVFLISLKAGGFGLTLTEADYVFVLDPWWNPAAENQAIDRTHRIGQTRS
VNVYRMVSVDTIEEKVVALQERKRDLFTSVVDSGSFSSGRITAADIRGLFEG
NT seq
3219 nt
NT seq
+upstream
nt +downstream
nt
atggaacccggggtcgagtgggtccgggacttcccggaggctgagctgaagcgactcttc
ggcgcacccaccttcttccggggccgcagctaccacgagtccggccacgtcaaggatctg
cacgtcgccgacggctactgccgcgccctggtcacgggcagcggccgccagatctacgag
accgaggccgagcgcaccggccggcggctgcgcacccactgcacgtgcccgctgggccac
tcgtgcaagcatgtggtcgcgatcatgctggaggcccgcgcccacgtcgacgcagccttc
ggcccggcgccgtcatgggaggaccagctcgccccgctgatcgcggggaccgatgctcgg
gcgtccgccggccgcagactcgcgctcgagtttgccgtcgctgcgacgacctacaccggc
acgccccgcatcacgcttcagccgctgcgggagggcagccgcacgccgtgggtgaagacg
ggcgccacgtggggcgacctcatccaggcttaccggtcccccgacctcaaccagccccag
cgcggcgtgctcgcgcagatccaccagctgagcccggacggcggctacggctacggcatc
gcacccaccctcgatctggccggcctcggaccgctggtgtggcccctgctgcagcgggcc
gccgcgctcggcgtggagctgctggccggcgagggcctgcggtcggtgcgcatggcagac
ggggccgccacggtcacgctcgacctcgcccgcgacgacgacggcgccatccacgcgcgc
ccccgcgcctccgtcctgccggcgggggcccccgggcgcctcctcctgctcggttccccc
gcccacggcctcggccacctcgacggcggcacgctcacgctctgggcgctggccgctccc
ccgcccgacgggctcgaccgcctcatcgccggcggcgacaccgtcgacgtccccgcccac
gacgccggccgcttcctgtccctctactaccccgcgttggcccgctcgggcgccgtcggc
tcggtggacggatccgtcgagccgccggacctcagcccaccgcggctccacctcaccgtc
cgccaccgtcccacgcacgtcgccggcctgacctggggcttcacgtatccgtcgccggtg
cccggcggggcgccgacggtgctgcccctcgacccggagcccgacggcccgccccgcgac
cacgccgccgagcagcgcctcaccgaccacggggccaggctgctgggcgcccatcccgcc
ctgctcggcacggggaggcagcccctcctcggcaccgcggagctggccgggatggcgctg
gccacgttcctcatcgagaccctccccgacctgcgcgcggccggggtcgacgtcgtcgag
gtgggtgacgccgccgagtacgccgaggcggacgaggccccggtcatccacctgagcgcc
gacgacggcgccgagcgcgactggttcaacctgcacatcaccgtcaccgtcgacgggcag
gacgtccctttcgaccagctgttcgcggcgctcgccgcgggcgacgaggccctgctactc
gactccggcacatggttcagcctcgacattcccgagttgcacgacctgcgccgcctcatc
gaggaggcccgcgacctcgtcgaccccgacagccccggcacgctgcggctcaacccgttc
caggccggcctgtgggaggaactcgtcggcctgggcgtcgtggcgcggcagagccgacgg
tggcgcgaggcggtcgagcgcctcctccccgacggcgaccgtcaggatattcctgtgcca
gcgggcctgcgcgccgacctgcgcccctaccaggagcgcggcttccggtggctggcggcg
ctgtgggacgcgggcctcggaggggtgctcgccgacgacatggggctcggcaagaccctg
cagaccctcgccctgctcgaacgcgcccgcgcggacggccagctcgagggcgcccccgtg
ctggtcgtcgcgcccgcgagcgtcgtcggcacctggctcgacgaggcggcccggttcgcc
cccgacctgcgggtcgtcgcgatcaccgcgaccgggcgcaagcgcggcgacgacgtcgcg
gccgccgtctccggcgcgcacgtcgtcgtcacctcctacacgctgctgcggctcgaggac
gccgagtaccgcgccctgacctggagcgggctgatcctcgacgaggcgcagttcgtcaag
aaccaccgctcccggacctaccaggccgcccgccggctcggcgcccccttcacgctcgcc
atcaccggcacgccgctggagaactcgctgatggatctctggtcgatgctctcgctgtcg
gcgcccgggttgtttccgaagccggagcagttcaccgagcggtatcgcaagcccatcgag
gtcgagcgcgaccgcggcgccctggagacgctccgccgccgcatccggcccttcgtgcta
cgccgcaccaagcgggaggtcgtccaggaactgccggagaagatcgagcagctccagcgc
atcgacctgaccccggcacaccgcaaggtctacgaccggtacctgcagcgcgagcgccag
cgggtgctcggcatgctcaacgacctggaccgcaaccgcgtcgccatcttccgcgccctg
accatgctgcggcagctggccctggacccggtcctcgtcgacgccgtcgacgacgcccac
gggcacggccgctcggccaaggtgacctcgctggtggagcagatcaccgagctggcggcg
gagggacaccgggcgctcgtcttcagcagcttcaccgggtacctcgcgctcgtgcgcgag
gcgctcgacgaggcgggcgtcggctacgtgtacctcgacgggcgcacccgggaccggccg
gcgcggatcgcccgcttccgcgagggcgacgaccccgtgttcctcatctcactcaaggcc
ggggggttcgggctgactttgacggaggcggactacgtgttcgtcctcgatccgtggtgg
aaccccgcggcggagaaccaggccatcgaccggacgcaccgcatcggccagacccgctcg
gtcaacgtctaccggatggtgtcggtggacaccatcgaggagaaggtggtggcgctgcag
gagcgcaagcgcgacctgttcacctcggtcgtcgactcggggtccttctcctcgggccgc
atcacggccgcggatatccgcgggctgttcgagggctga
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