Tessaracoccus lapidicaptus: TLA_TLA_02104
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Entry
TLA_TLA_02104 CDS
T06975
Symbol
dnaX_1
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
tla
Tessaracoccus lapidicaptus
Pathway
tla03030
DNA replication
tla03430
Mismatch repair
tla03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tla00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
TLA_TLA_02104 (dnaX_1)
03430 Mismatch repair
TLA_TLA_02104 (dnaX_1)
03440 Homologous recombination
TLA_TLA_02104 (dnaX_1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tla03032
]
TLA_TLA_02104 (dnaX_1)
03400 DNA repair and recombination proteins [BR:
tla03400
]
TLA_TLA_02104 (dnaX_1)
Enzymes [BR:
tla01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
TLA_TLA_02104 (dnaX_1)
DNA replication proteins [BR:
tla03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
TLA_TLA_02104 (dnaX_1)
DNA repair and recombination proteins [BR:
tla03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
TLA_TLA_02104 (dnaX_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNA_pol3_gamma3
DNAX_ATPase_lid
AAA
RuvB_N
AAA_22
AAA_30
AAA_14
Rad17
AAA_18
Mg_chelatase
zf-CXXC
AAA_28
DEAD
nSTAND3
TsaE
Herpes_Helicase
ORC-CDC6-like
Motif
Other DBs
NCBI-ProteinID:
VEP40878
LinkDB
All DBs
Position
1:2278801..2280993
Genome browser
AA seq
730 aa
AA seq
DB search
MDDEYDEDENALLDEGYGSADLPDFEPMEGPGLFDEPDDEPAEESTQAAPAVAAAAVPAP
APRRPEAPPSPLALYRRYRPDTFADVIGQEHVTVPLQRALSSNRVNHAYLFSGPRGCGKT
TSARILARCLNCVEGPTPTPCGVCDSCQDLARGGPGSIDVIEIDAASHGGVDDARDLRER
AYFAPVASRYKIYIIDEAHMVTTQGFNALLKLVEEPPPHTKFIFATTEPEKVIGTIRSRT
HHYPFRLVPPRLLTDYLGEICRTEGVAVDQAALPLVVRAGAGSVRDSLSVLDQLLGGAGD
DGVSYDQAAALLGYTPDALLDEIMDAFAAGDAAGVFRTVDKVIEVGQDPRRFAEDLLRRL
RDLVILAAVPEAATNGLLDVAADQAQRLQTQVAGLGAGELTRAAEVIATGLTDMRGTTAP
RLHLELMCARVLLPGADSDERGLHARMDRLERRVGMMGGQAGPAPVEDWADAGEPTVRMQ
RPADQSRRASGQAQAAPAAPAPAPEPAPAPSAAAPAPPAPPAAVREPVAERRPAGEAPRR
RPAGAPPGSTVAPPPAAPEPPAPAGPRPDGGPGQLTAAELRRVWPNVLEEVKRRRRFTFM
LLSQHAQVLDVADGVLHLGFAQTGPRDNFGSGGSQDVLADAIIETIGVELRINAVLASGE
QAQERPAQRPSGAPVAPPPPPEPVRAPEPPEPDVDISSDDEVLDSAHNAEELLSSTFGAE
IIAVRDADDA
NT seq
2193 nt
NT seq
+upstream
nt +downstream
nt
gtggacgacgagtacgacgaggacgagaacgccctcctcgacgagggatacggctcagcg
gaccttccggacttcgagccgatggagggccccgggctgttcgacgagcccgacgacgag
cccgcggaggagagcacgcaggcggcgccggctgttgccgccgcggccgtcccagcgccc
gcgccgcgccgtcccgaggccccgccgtcgccgctggcgctctaccgccgctatcggccg
gacacgttcgccgacgtcatcgggcaggagcacgtcaccgtcccgctgcagcgggcgctg
tccagcaaccgggtcaaccacgcctatctgttctccgggccccgcggctgcggcaagacc
acctcggcccgcatcctcgcgcgctgcctgaactgcgtcgaggggcccactcccaccccg
tgcggcgtgtgtgactcctgccaggacctggcgcgcggcgggccgggctccatcgacgtc
atcgagatcgacgccgcgtcgcacggcggcgtcgacgacgcccgggacctgcgcgagcgc
gcctacttcgcgcccgtcgcgagccgctacaagatctacatcatcgacgaggcgcacatg
gtcacgacgcagggcttcaacgccctgctcaagctcgtcgaggagcccccgccgcacacc
aagttcatcttcgccaccacggagccggagaaggtcatcgggaccatccggtcgcgcacg
caccactacccgttccgcctggttccaccccggctgctcaccgattacctcggcgagatc
tgccgcaccgagggcgtggcggtggaccaggccgcgctcccgctcgtcgtgcgcgccggc
gccgggtcggtgcgcgactcgctctcggtcctcgaccagctgctcggcggcgcgggggac
gacggcgtcagctatgaccaggccgcggctctcctcggctacacgcccgacgccctgctc
gacgagatcatggacgccttcgccgccggggacgccgccggggtgttccgcacggtggac
aaggtcatcgaggtcggccaggatccgcgtcgcttcgccgaggacctgctccggcggctg
cgcgacctcgtcatcctcgctgccgtgcccgaggcggcgaccaacgggctgctcgacgtc
gccgcggaccaggcgcagcgcctccagacgcaggtggccggcctcggcgccggagagctg
acccgcgccgcggaggtcatcgccaccggcctgaccgacatgcgcggcaccacggccccc
cggctgcacctcgagctcatgtgcgcccgggtcctgctgccgggtgccgactcggacgag
cgtggcctgcatgcccgcatggaccgcctcgaacggcgcgtcgggatgatgggcggccag
gcggggccggcccccgtcgaggactgggccgacgccggagagcccacggtgcggatgcag
cgcccggcggaccagagccgccgcgcctccggccaggcacaggctgctccggcggctccc
gctccggcgccggagcccgccccggccccgtcagccgcggctcctgctcctcccgcccct
cccgccgcagtccgcgaacccgtggccgagcggcggccggccggtgaggcgccccgacgc
cgtcccgccggcgccccgccgggatccaccgtcgcgccgccccccgcggcgcctgagcct
ccggccccggccgggccccggccggacggcggccccgggcagctcaccgcggcggagttg
cgtcgcgtgtggcccaacgtgctggaggaggtcaagcgtcgccggcgcttcaccttcatg
ctgctcagccagcacgcgcaggtactcgacgtcgccgacggcgtgctccacctcgggttc
gcccagaccgggccgcgcgacaacttcggcagcggcggcagccaggacgtcctcgccgac
gccatcatcgagaccatcggcgtcgaactgcggatcaacgcggtcctcgcgtcgggggaa
caggcccaggaacgccccgcccagcggccgtccggcgcccccgtcgcgccgcccccgccc
cccgagcccgtccgcgcgcccgagccaccggagccagacgtcgacatctcgtccgacgac
gaagtgctggacagcgcccacaacgccgaggaactgctcagcagcaccttcggggccgag
atcatcgcggtgcgcgacgccgacgatgcctga
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