Thioclava litoralis: RPE78_03090
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Entry
RPE78_03090 CDS
T10820
Name
(GenBank) cryptochrome/photolyase family protein
KO
K06876
(6-4)DNA photolyase [EC:
4.1.99.13
]
Organism
tlb Thioclava litoralis
Brite
KEGG Orthology (KO) [BR:
tlb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tlb03400
]
RPE78_03090
Enzymes [BR:
tlb01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.13 (6-4)DNA photolyase
RPE78_03090
DNA repair and recombination proteins [BR:
tlb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
Direct repair
RPE78_03090
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DPRP
Motif
Other DBs
NCBI-ProteinID:
WRY34288
LinkDB
All DBs
Position
complement(647835..649367)
Genome browser
AA seq
510 aa
AA seq
DB search
MKNNPRLVLVLGDQLTLEGAALRAADKARDVVVMAEVRAETDYVGHHKQKIALVFSAMRH
FAETLRAEGWQVAYTALEDAGNSGSITGELLRRAEEFGAKSAVTIAPGEWRLRQALEDCP
IPVVQLPDDRFLCSEAEFADWAKGRKSLRMEYFYREMRRKTGLLMEGDAPEGGKWNYDAE
NRKPAQADLFRVKAPQFASDEVTREVLDLVAREFADNFGGLEGFNWAVDRAGALEALDHF
IAHNLADFGTYQDAMLEDDPLLYHSLLSPYLNLGLLGPLEVCQAAARAYAAGDVPLNSAE
GFIRQIIGWREYVRGIYFHEGPDYTSRNHLDQHRKLPWAYWGGETKMNCLSHAVAQTRDL
AYAHHIQRLMVTGNFALLAGVDPAQVQEWYLAVYIDAFEWVEAPNTAGMSQFADGGVIAS
KPYVSSGAYIDRMSDYCGSCAYSVKAKTGEGACPFNLLYWHFLDRNREKFANNPRMAVIY
RSWDKRKPEDRETILGQAEVMLNKIAQDAF
NT seq
1533 nt
NT seq
+upstream
nt +downstream
nt
atgaagaataacccgcgtctggttctggtgctgggggaccagttgacgcttgagggcgcg
gccttgcgtgccgccgacaaggcgcgcgatgttgtcgtcatggccgaggttcgcgccgag
accgattatgtcggccaccacaaacagaagatcgcgctggtcttttctgccatgcgccat
tttgccgaaaccctgcgggcggagggctggcaggtcgcctatacggcgctggaggatgcg
ggcaattccggctcgatcacgggcgagcttctgcgccgcgccgaggagtttggcgcaaaa
tcggcggtgacgattgcgcccggagaatggcgtttgcggcaggcgctggaagactgcccg
atccctgtggtgcagctgcccgatgaccgcttcctctgttccgaagccgagttcgctgat
tgggccaagggtcgcaagtccctgcggatggagtatttctaccgcgagatgcgccgcaag
acgggcctcttgatggaaggcgatgcccccgagggcggtaagtggaattacgacgccgag
aaccgcaagcccgcacaggccgatctgttccgggtgaaggcgccgcagtttgcctccgat
gaggtcacgcgggaggtgcttgatctggtggcgcgggagtttgcggataacttcggcggg
ctggaaggcttcaactgggcggtagatcgggcaggggcgcttgaggcgctggatcatttc
atcgcgcataatctggcggatttcgggacctatcaggatgcgatgctggaagatgatccg
ctgctgtatcactcgcttctgtcgccctatctgaacctcgggcttttgggaccgctggag
gtctgtcaggcggcggcccgcgcctatgcggcgggggatgtgccgctgaattcggcggaa
gggttcatccggcagatcatcggctggcgcgaatatgtgcggggcatttatttccatgag
gggcccgattatacctcgcgcaaccatctggaccagcaccgcaagctgccttgggcctat
tggggcggcgaaaccaagatgaactgcctgtcccatgccgtggcccagacccgcgatctg
gcctatgcccatcatatccagcggctgatggtcaccggaaacttcgcgcttctggcaggg
gtggaccccgcgcaggtgcaggagtggtatctggcggtctatattgatgcgttcgaatgg
gtcgaggcgcccaataccgcaggcatgagccagtttgccgatggtggcgtgattgcctcc
aaaccctatgtatcctcgggcgcctatatcgaccggatgtcggattattgcgggtcttgc
gcctattcggtgaaggcaaaaacgggcgagggggcttgcccgttcaatctgctctattgg
cactttctcgacagaaaccgagagaaatttgccaataacccccgtatggctgtcatttat
cgatcatgggacaaacgaaagcccgaagatcgtgaaacgatcctcgggcaggcggaagtc
atgctgaacaagatcgcgcaggacgcgttttaa
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