Thioclava litoralis: RPE78_03750
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Entry
RPE78_03750 CDS
T10820
Name
(GenBank) sigma-54 dependent transcriptional regulator
Organism
tlb Thioclava litoralis
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
HTH_8
AAA_5
HTH_7
AAA_16
Mg_chelatase
HTH_23
AAA_2
HTH_38
HTH_28
Motif
Other DBs
NCBI-ProteinID:
WRY34413
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Position
770657..772063
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AA seq
468 aa
AA seq
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MMPIVPTPSSKPFFDAAEVLIVEDISSLQLVYASHVQKMGLTAHIVDTAKQALSLFTQKP
FSIVLLDLMLPDGDGMELIDRLLRLAPNTQIIVITAERSPERAVTAMRAGAFDYLTKPVS
EARLQSVVSRALSHAREIRPLTRDAAHSGAVGAFIGHAPEMLKLYDRIRQTAASDASVFI
VGESGTGKEICAEAIHLLSPRASNPFVVFDCSAIRQDRFDSELFGHMRGALPGAITDHAG
AAMRADGGTLFLDKLTELDPALQGKLLRFLQTQRVRPVGAAEERKVDLRIISASDIPPQE
AVEQGKLRSDLFYRLCVVAIHIPPLRNRSEDIPALAEHFLTEFSAQEQRNFTRITPQALQ
RLKSAYWSGNVRELMNMIRSAVILNCGPDLTADMLPTSDGTHMGDMSGGNELSMFDGQSL
AEIERRIIEYRLSQNDHSVPQVARGLHIAPSTLYRKLEAWKTTGEEPT
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atgatgcccattgtgcccacgccctcatcaaagccatttttcgatgctgctgaagtcctg
attgtcgaggatatttcaagcctccaactcgtgtacgcctcgcatgtgcagaaaatgggg
ctgacagcgcatatcgttgataccgccaaacaggcactgtcgctttttacccagaaaccg
ttctcgattgtactgctggatctgatgctgcccgacggcgacggcatggagttgattgat
cgtctgctgcggctggcgcccaatacccagatcattgtcatcaccgcagaacgttcgccc
gaacgcgccgtaaccgcgatgcgtgccggagcgtttgactatctcaccaaaccggtcagt
gaagcgcgcctgcaatcggttgtgtcgcgcgccttgtcccatgcccgcgagatcaggccg
ctgacacgcgatgcggcacattccggcgcggtgggggcctttatcggccatgcgccggaa
atgcttaagctctatgaccgtatccggcagacggcggcgtccgatgcatcggtgtttatc
gtcggagaatcagggaccggcaaggaaatctgcgctgaagccatccatcttctgtcgccc
cgtgcgagcaatccgtttgtggtcttcgactgttcggccatacgtcaggaccgtttcgat
tccgaactgttcggccatatgcgcggggccttgccgggcgcgattaccgaccatgcagga
gccgccatgcgcgccgatggcggcacattgtttctggacaagctgaccgaactggacccc
gccttgcagggcaagttgctgcggtttctccagacccagagggtacgtcccgtaggcgct
gccgaagagcggaaagttgacctcaggatcatcagcgcctcggatattccgccgcaagag
gcggtggaacagggcaagctacgctctgatctgttttacaggctctgcgtggtggccatc
catattccgcccctgcgcaaccggtcggaagacatccctgctttggcagagcacttcctg
acagaattctccgcgcaggagcaacgcaacttcacgcgcatcacgccgcaggccctgcaa
cggctgaaatcggcatattggtccggcaatgtgcgggaactgatgaacatgatccgctcg
gcggttattctgaattgcggacccgatctgacagcggatatgctcccgacatctgacgga
acgcatatgggtgatatgtcgggcggcaatgagctgtcgatgttcgacgggcaaagcctt
gcggagatcgagcggagaatcatcgaataccgcctgagccagaatgaccattccgtaccg
caggtcgcgcgggggctgcatattgcgccctcgaccctctaccggaagctcgaggcctgg
aagaccaccggcgaagagccgacttag
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