Thioclava litoralis: RPE78_04105
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Entry
RPE78_04105 CDS
T10820
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
tlb Thioclava litoralis
Pathway
tlb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tlb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
RPE78_04105
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tlb03400
]
RPE78_04105
Enzymes [BR:
tlb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
RPE78_04105
DNA repair and recombination proteins [BR:
tlb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
RPE78_04105
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_C
DEAD
PriA_3primeBD
ResIII
Helicase_C
Zn_ribbon_PriA
AAA_22
AAA_30
SPDY
Imm49
HTH_IclR
zf-UDP
Motif
Other DBs
NCBI-ProteinID:
WRY34482
LinkDB
All DBs
Position
845112..847301
Genome browser
AA seq
729 aa
AA seq
DB search
MSGQDWFTDGARVSVLTAEPVGRPLDYLAPEGGCWAGAFVMVPLGPRKVLGVVWGAGDGD
FAAAKLRRVLQVMDVPPMKAEMRQFLMRMAAYTMTPLPQVLRLATRAPGLFDAPGLRKIY
RLGSGEPSRMTDARARVLEVLRDHGGAGFQLGELAALAGVTTSVVKGMLTSGAVVEADVP
RDAPFARLDPSLPGKVLSEAQRAAVARLEDGSGGFAPVLLKGVTGSGKTEVYLEAVADCL
RQGRQALVLLPEIALSSEFLARVEARFGAKPGEWHSGVTQTERRRLWKATASGEVQMVAG
ARSALFLPFRDLGLIVVDEEHDTSYKQEEGVLYNARDMAVLRASLCGAQVVLASATPSLE
TWANAESGKYARVDLGARFGASKLPEMRPIDMRNESIESQHWIGPTLVGAVIERVRRGEQ
AMLFLNRRGYAPVTICRACGHQIGCDHCDARMVEHRFMKQLVCHQCGETKPIPTQCPNCK
VEGKLAPVGPGVERLAEEVRERFPDSRMAVLSSDLFTTARALKEAISDIANGGADIIIGT
QIVAKGHNFPKLSLVGVIDADLGLQGSDLRAAERTFQLMRQVAGRAGRAETEGLALLQTY
QPEHPVIRAILGGDEEAFWRAEAAQRQAQHVPPYGRMAGIILSGPDLKPLFDIGEALSRQ
SGPLREIEATVYGPAPAPVARVRGRHRVRLLVKADKRAPLQAALARWVAQVRLPNNVRLA
IDIDPQSFM
NT seq
2190 nt
NT seq
+upstream
nt +downstream
nt
atgagcgggcaggactggtttacggacggggcgcgggtctcggttctgacggcggagccg
gtcgggcggccactggattatctggcgcctgaagggggctgctgggcgggcgcctttgtc
atggtgcctttggggccgcgcaaggtcttgggcgttgtctggggggcgggcgatggggat
tttgccgcggccaagttgcggcgcgttttacaggtgatggatgtgccgccgatgaaggca
gagatgcggcagttcctgatgaggatggccgcctatacgatgacgcccctgccgcaggtt
ttgcggctggccacccgtgcgccggggctgtttgacgcgccggggctgcgcaagatctac
cgtcttgggtcgggcgagccgtcgcggatgaccgatgcgcgggcgcgggtgttggaggtt
ttgcgcgaccatggcggggcgggctttcagttgggagaactggccgctttggcgggggtg
acgacatccgtggtgaaagggatgctgacctctggcgcggtggtggaggctgatgtgccg
cgcgatgcgccctttgcgcggcttgatccgtccttgccgggcaaggtgctatccgaggcg
caaagggccgctgtggcacggctggaggatgggtctggtgggtttgcgccggttttgctg
aagggtgtgacgggctcgggcaagacggaagtgtatctggaagcggtggccgattgtctg
cggcaggggcggcaggctttggtgcttttgcccgagattgccttgtcatcggagtttctc
gcccgtgtggaggcgcggtttggcgcaaaaccgggcgagtggcattccggcgtgacccag
accgagcggcggcggttgtggaaagccacggcctcgggcgaggtgcagatggtggcgggg
gcgcgttcggcgctatttctgcccttccgtgacttggggctgatcgtggtggatgaggag
catgacacctcctacaagcaggaggagggtgtgttgtataacgcccgcgatatggcggta
ttgcgggcatccctgtgtggggcgcaggtggttctggcctcggccacgccatcgcttgag
acctgggccaatgccgagagcggcaaatatgcgcgggtcgatctgggcgcgcggtttggc
gcctccaagctgcccgagatgcggcccatcgacatgcgcaacgagagcatcgagagccag
cactggatcggcccgacgttggtgggcgcggtgatcgagcgggtgcgccgtggcgagcag
gcgatgctgtttctcaaccgtcgcggctatgcgccggtgacgatctgtcgggcctgtggg
catcagatcggctgtgaccattgcgatgcgcggatggtggagcaccgcttcatgaagcag
cttgtctgccatcaatgcggcgagacgaaaccgatccccacgcaatgtcctaattgcaag
gtcgaaggcaagctggcacccgttggccccggtgtcgagcgtctggccgaggaggtgcgc
gagcggtttcccgacagccggatggcagtgctgtcgtctgatctgtttaccaccgcgcgg
gcgctgaaggaggcgatctctgacattgccaatggcggggcggatatcatcatcggcacg
cagatcgtggccaaggggcataacttcccgaaactgtcgctggtgggggtgatcgatgcc
gatctggggttgcaggggtccgacctgcgcgccgccgagcgtactttccagctgatgcgg
caggtggcgggccgtgcgggccgcgccgagaccgaggggctggcgcttttgcagacctat
cagcccgagcatccggtgatccgcgcgattctgggcggcgatgaggaagccttctggcgc
gccgaggccgcccagcgtcaggcgcagcacgtgccgccctatgggcgtatggcggggatt
atcctgtcggggccggatctgaagccgctgtttgacattggcgaggcgctttcgcgccag
tcgggacctttgcgcgagatcgaggccaccgtctatggccctgcccccgcccctgtggca
cgcgtgcgcgggcggcaccgcgtgcggctgctggtgaaggccgacaagcgggcacctttg
caagcggcccttgcgcgttgggtggcacaggtgcgcctgcccaataatgtgcgccttgcg
atcgacatcgacccgcaaagcttcatgtag
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