Thioclava litoralis: RPE78_04505
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Entry
RPE78_04505 CDS
T10820
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
tlb Thioclava litoralis
Brite
KEGG Orthology (KO) [BR:
tlb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tlb03009
]
RPE78_04505 (rimO)
Enzymes [BR:
tlb01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
RPE78_04505 (rimO)
Ribosome biogenesis [BR:
tlb03009
]
Prokaryotic type
ribosomal protein modification factors
RPE78_04505 (rimO)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
TRAM_2
UPF0004
CLP1_P
Thioredoxin_6
Motif
Other DBs
NCBI-ProteinID:
WRY34559
LinkDB
All DBs
Position
925686..927080
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AA seq
464 aa
AA seq
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MSQNPPNLRPDLAPRIRVDEPVREGQPKIGMVSLGCPKALVDSERILTRLRAEGYAISPD
YTGAEAVIVNTCGFLDSAKAESLEAIGEALKENGKVIVTGCLGAEPDYITGVHPKVLAVT
GPQQFEQVLDAVHGAVPPAPDPFVDLLPAQGVKLTPRHYSYLKISEGCNHKCKFCIIPDM
RGKLASRPAHAILRETEKLLEAGVREILMISQDTSAYGLDRKHDLSPWKGGEVRAHITDL
TREMGKMVKEAEAWLRLHYVYPYPHVRDLIPLMAEGLALPYLDIPFQHAHPDVLKRMARP
AASAKTLDEIAAWRADCPEIVLRSTFIVGYPGETEEEFQYLLDWMDEAKLDRVGCFQYEN
VDGARSNDLPDHVDPEVKQDRWNRFMEKAQQISEAKLQAKVGSLQQVIVDEIDEEGATCR
TRADAPEIDGNLFIDEGFETLSVGDMVTVEVDEASDYDLWGRLV
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
atgagccagaaccctccgaacctgcgccccgaccttgcgccccgcatccgtgtggacgaa
cccgtccgcgagggtcagccgaagatcggcatggtcagccttggctgccccaaggctctg
gtggatagcgagcgcatcctgacccgcctgcgcgccgaaggctatgcgatcagccccgac
tatacgggcgccgaggcggtgatcgtgaatacctgcggctttttggacagcgccaaggcc
gaaagccttgaggcgattggcgaggcgctgaaggaaaacggcaaggtgattgtcaccggc
tgtctgggtgccgagcccgactatatcaccggcgtgcatcccaaggtgctggcggtgacc
ggcccgcagcaattcgagcaggttctggatgccgtgcatggcgcggtgccgcccgcgccc
gacccctttgtggacctgctaccggcacagggcgtgaaactgacgccgcgccattacagc
tatctgaagatctcggaaggctgtaaccacaagtgcaaattctgcatcatccccgatatg
cggggcaaactggcctcgcgtccggcgcatgcgatcctgcgcgagaccgagaagctcttg
gaagccggtgtgcgcgagatcctgatgatctctcaggatacctcggcctatggtctggac
cgcaagcatgacctttccccttggaaaggcggcgaggtgcgcgcccatatcaccgatctg
acccgcgagatgggcaagatggtgaaagaggccgaagcgtggctgcggctgcattatgtc
tacccctatccgcatgtgcgcgacctgatcccgctgatggcggaaggtctggccctgccc
tatctggatatccccttccagcatgcgcatcccgatgtgctcaaacgcatggcgcggccc
gcggcttcggccaagacgctggatgagatcgccgcttggcgggcggattgccccgagatc
gtcctgcgatccaccttcatcgtgggctatcccggcgagacggaagaggaattccaatat
ctgctggactggatggatgaggccaaactcgaccgcgtcggctgcttccagtatgaaaat
gtggatggcgcgcgctcgaacgacctgcccgaccacgtggaccccgaggtcaaacaggac
cgctggaaccgcttcatggagaaggcgcagcagatctccgaggccaagcttcaggccaag
gttggttcgctgcaacaggtcatcgtggacgagatcgacgaggaaggcgccacttgccgc
acccgcgccgatgcaccggaaatcgacggcaacctgttcatcgacgagggtttcgaaacc
ctcagcgtgggcgatatggtcactgtcgaggtggatgaggcctcggattacgacctctgg
gggcggctggtttaa
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