Thioclava litoralis: RPE78_05510
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Entry
RPE78_05510 CDS
T10820
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
tlb Thioclava litoralis
Pathway
tlb00300
Lysine biosynthesis
tlb00470
D-Amino acid metabolism
tlb01100
Metabolic pathways
tlb01110
Biosynthesis of secondary metabolites
tlb01120
Microbial metabolism in diverse environments
tlb01230
Biosynthesis of amino acids
Module
tlb_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
tlb00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
RPE78_05510 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
RPE78_05510 (dapF)
Enzymes [BR:
tlb01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
RPE78_05510 (dapF)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DAP_epimerase
BT_MCC_alpha
Motif
Other DBs
NCBI-ProteinID:
WRY34747
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All DBs
Position
complement(1112120..1112914)
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AA seq
264 aa
AA seq
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MKMHGLGNDFVVIDARDGVDPVTPALAEALADRHRGVGFDQLALIGPSQEADFHLKFYNS
DGSLSGACGNASRCVSDWMMGQLGKDHVRFTTDRGQLEAKRAANGMVSVNMGAPILEARL
IPFDGDPKATGIDGDPVAVGMGNPHCIFFVEDAEKVALESWGAEIEHHPSFPERTNVEFA
SVTAPDHLRMRVWERGAGVTLACGSGTCATAVAAHLRGLTGRRVTVDVDGGRLEIDWRED
GVWMTGPTAFVFRAELTSDFLGAL
NT seq
795 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatgcatggccttggaaacgatttcgtcgtgattgacgcccgtgacggggtcgat
ccggtgacacctgctttggccgaggccttggcagaccggcaccgtggtgtcggtttcgat
cagctcgctttgatcggcccctcgcaagaggccgatttccatctgaaattctacaattcg
gatggctcgctttcgggggcgtgtggcaatgcctcgcgctgtgtctcggactggatgatg
ggtcagcttggcaaggaccatgtgcgcttcaccaccgatcgtggccagcttgaggcgaag
cgcgccgcgaatgggatggtctcggtcaatatgggggcgccgattctggaggcgcgtttg
attccctttgacggcgatcctaaggcgacgggaatcgatggtgatccggtggccgtgggc
atgggcaacccgcattgcatcttctttgtcgaggatgccgagaaggtcgcgctggaaagc
tggggcgccgagatcgagcatcacccgtccttccccgagcgcaccaatgtcgagtttgcc
tctgtcacggcccccgatcatctgcgcatgcgggtgtgggagcgtggcgcgggcgtgacg
ctggcttgtggctctggcacctgcgcgaccgccgtggcggcgcatctgcgcggcctcacg
gggcggcgggtgacggtggatgtggacggcggtcggcttgagatcgactggcgcgaggat
ggcgtctggatgaccggccccacggcctttgtgttccgcgcggaactgacctctgatttt
ctgggtgctctatga
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