Thioclava litoralis: RPE78_06090
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Entry
RPE78_06090 CDS
T10820
Symbol
dnaQ
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
tlb Thioclava litoralis
Pathway
tlb03030
DNA replication
tlb03430
Mismatch repair
tlb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tlb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
RPE78_06090 (dnaQ)
03430 Mismatch repair
RPE78_06090 (dnaQ)
03440 Homologous recombination
RPE78_06090 (dnaQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tlb03032
]
RPE78_06090 (dnaQ)
03400 DNA repair and recombination proteins [BR:
tlb03400
]
RPE78_06090 (dnaQ)
Enzymes [BR:
tlb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
RPE78_06090 (dnaQ)
DNA replication proteins [BR:
tlb03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
RPE78_06090 (dnaQ)
DNA repair and recombination proteins [BR:
tlb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
RPE78_06090 (dnaQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
RNase_H_2
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
WRY34852
UniProt:
A0ABZ1E4X9
LinkDB
All DBs
Position
1237022..1237708
Genome browser
AA seq
228 aa
AA seq
DB search
MREIVLDTETTGFEPNEGHRIVEIGAVELFNHMPTGNHYHQYINPERDMPTEAFQVHGLG
NEFLADKPKFIEIAQDFLDFIGPDSKLVIHNAKFDMRFLNAELGWVKKPLIADDRAVDTL
TMARRMFPGSPATLDALCRRFSIDNSSRTLHGALLDSEILAEVYLELIGGRQPGFGLNLD
QHAQNAGPSEIWRPAPRPQSLPSRVTEIEAAAHAAYVEKLGENAIWKR
NT seq
687 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgagattgttctcgataccgagaccaccggatttgaaccgaacgagggccaccgt
atcgttgaaatcggtgcggtcgagctgttcaaccatatgccgaccggcaatcactaccac
cagtatatcaaccccgagcgggacatgccgacagaggcgttccaggtgcatggtttgggg
aatgagtttctggctgataagccgaaattcattgaaatcgcacaggattttctggatttt
atcggaccggattccaagctggtgatccataacgccaaattcgatatgcggtttctcaat
gccgaacttggctgggtgaaaaagccattgatcgctgatgaccgcgcggtcgatacgctg
acaatggcgcggcggatgtttcccgggtctccggccacgcttgatgcgctatgtcggcgg
ttttctatcgataactcctcgcggacgctgcacggggcccttctggacagtgaaattctg
gccgaagtctatctggaacttattggcgggcgtcagccgggctttggtcttaatcttgat
cagcatgcccaaaatgctggcccttccgagatctggcgccctgcaccacgtcctcagtcc
ctgccctcccgcgtgaccgaaatcgaggcggcggcccatgccgcttatgtcgagaagctg
ggagaaaacgcaatctggaaacgctga
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