Thioclava litoralis: RPE78_06105
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Entry
RPE78_06105 CDS
T10820
Name
(GenBank) RNA pyrophosphohydrolase
KO
K08311
putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
Organism
tlb Thioclava litoralis
Pathway
tlb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tlb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
RPE78_06105
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tlb03019
]
RPE78_06105
Messenger RNA biogenesis [BR:
tlb03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
RPE78_06105
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NUDIX
Motif
Other DBs
NCBI-ProteinID:
WRY34855
UniProt:
A0ABZ1E2D8
LinkDB
All DBs
Position
complement(1240425..1240904)
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AA seq
159 aa
AA seq
DB search
MQDFSKLPYRPCVGIVLINHDGLIWAGKRIDAKVDAWQMPQGGIDEGEKPKEAGLRELWE
ETGLTADMVEKLGKTEDWVTYDLPDELLGKVWGGKYRGQKQKWFAFRFLAEDSAVNIATE
HPEFSEWAWKSADELITSIVPFKRKVYETVLAEFKDLVK
NT seq
480 nt
NT seq
+upstream
nt +downstream
nt
atgcaggatttcagcaagctcccctaccggccctgcgtcggtatcgtgctgatcaatcac
gacggcctgatctgggccggaaagcgcatcgatgccaaggtcgacgcatggcagatgccg
caaggcggtatcgacgagggtgaaaagcccaaagaagccggtctgcgcgagctatgggag
gaaaccggcctgactgcggatatggtcgaaaagcttggcaagaccgaagactgggtgacc
tatgatcttcccgacgagcttttgggcaaggtctggggcggaaaatatcgtggccagaaa
cagaaatggttcgccttccgctttctggccgaggatagcgcggtcaatattgccaccgaa
catcccgaattctcggaatgggcatggaaatccgccgacgagctgatcacctcgatcgtg
ccgttcaagcgcaaggtctatgaaaccgttctggccgaattcaaagatcttgtgaaatag
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