Thioclava litoralis: RPE78_06240
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Entry
RPE78_06240 CDS
T10820
Name
(GenBank) CCA tRNA nucleotidyltransferase
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
tlb Thioclava litoralis
Pathway
tlb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tlb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
RPE78_06240
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tlb03019
]
RPE78_06240
Enzymes [BR:
tlb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
RPE78_06240
Messenger RNA biogenesis [BR:
tlb03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
RPE78_06240
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol
PolyA_pol_RNAbd
ObcA_N
Motif
Other DBs
NCBI-ProteinID:
WRY34882
LinkDB
All DBs
Position
complement(1265986..1267131)
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AA seq
381 aa
AA seq
DB search
MKLTDDWLTAPATQAVMQMLETAGHQAFFVGGCVRNAALGAPVSDLDIATDAPPQSVITL
ANAAGLKPIPTGIEHGTVTVVSDHIPHEITTFRRDEETDGRHALVAFSTDIAEDAARRDF
TMNALYARSDGEVLDPLGSGLADLQARHLRFVGHAEDRIREDYLRILRFFRFTAWYGAPE
NGPDAEGLAACAALAEGIDGLARERIGAEMRKLLAAPDPAPVIASMAQTGILSRLLPGAD
AKALPVLIHLENGRGPDPLRRLACLTSQPATAALRLSRAEAKRLARLREAAQDIGSPTEM
GYRLGVEDGCDAWLVRAALLEMPMTPDWPAQIAFGAAQTFPVTARDLLPALQGKELGDKL
AELEMRWIGSGFTLDRAHLLG
NT seq
1146 nt
NT seq
+upstream
nt +downstream
nt
atgaaactgacggatgactggctgacagcccctgccacacaggccgtaatgcagatgctt
gaaacagccggccatcaggcgttctttgtcggtggctgtgtgcgcaatgccgccttgggt
gcaccggtcagcgatctggatattgccaccgatgcgccgccacaaagcgtgatcacactc
gccaatgccgctggtctgaaacccattcccacgggcatagaacacggcacggtgacagtg
gtctcggaccatatcccgcatgaaatcaccaccttccgccgcgacgaggagaccgatggc
cgccacgctctggttgccttttccacggatattgccgaggatgcggcgcggcgcgatttc
acgatgaacgccctttacgcacgctcggatggcgaggtcctcgacccgctgggcagcggt
ctggcggatctgcaggcgcgtcatctgcggtttgtcggacatgcggaagaccggattcgc
gaggactatctgcgtatcctgcgcttcttccgtttcaccgcatggtatggtgcgcctgaa
aacggtccggatgccgaaggtctggccgcctgtgccgccttggccgagggcattgacggc
ctcgcccgcgagcgtatcggcgcggaaatgcgcaagcttctggccgcgcccgatcctgcg
cccgtcattgcctcgatggcgcaaaccggcatcctgtcccgcctcctgcccggtgcggat
gccaaagccctgcccgtgctgatccatctggaaaacgggcgcggccccgatccgctgcga
cgtctggcctgcctgacatcgcagcccgccaccgccgcattgcgcctgtcacgggccgag
gcaaaacgtctggcccgtctgcgcgaggccgcgcaagacatcggcagtcccaccgaaatg
gggtatcgtctgggggtcgaggacgggtgtgatgcatggcttgtccgcgcagcacttctg
gaaatgccgatgacacccgactggcccgcgcagattgcctttggtgccgcacagacattt
ccggtcaccgcccgcgatcttttgcccgccttacagggcaaggagttgggcgataagctg
gccgagctggaaatgcgctggatcggcagcggcttcacgctggatcgtgcgcatctgcta
ggctga
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