Thioclava litoralis: RPE78_06510
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Entry
RPE78_06510 CDS
T10820
Name
(GenBank) HU family DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
tlb Thioclava litoralis
Brite
KEGG Orthology (KO) [BR:
tlb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tlb03032
]
RPE78_06510
03036 Chromosome and associated proteins [BR:
tlb03036
]
RPE78_06510
03400 DNA repair and recombination proteins [BR:
tlb03400
]
RPE78_06510
DNA replication proteins [BR:
tlb03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
RPE78_06510
Chromosome and associated proteins [BR:
tlb03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
RPE78_06510
DNA repair and recombination proteins [BR:
tlb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
RPE78_06510
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_1
HU-CCDC81_euk_2
DUF5760
SasG_E
IBP39
Motif
Other DBs
NCBI-ProteinID:
WRY34930
LinkDB
All DBs
Position
complement(1323403..1323690)
Genome browser
AA seq
95 aa
AA seq
DB search
MSKPMTKTQLVTALAETMGSDKKTASAALDAISEIVTKEVAEGGAVTLPGLGKFMCKDRP
ERQVRNPATGETMTKPADRQVKVTIAKALKDSVNG
NT seq
288 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaaaccgatgaccaaaacccaactggtgaccgctctggccgaaaccatgggttcg
gataagaagactgcatcggcagctctggatgcgatcagcgaaatcgtgaccaaagaagtg
gctgaaggcggcgctgtgacgcttccgggtcttggcaaattcatgtgcaaagatcgcccc
gagcgtcaggtccgcaaccccgccaccggcgaaaccatgaccaaaccggcagaccgtcag
gtgaaagtcaccatcgcaaaagcgctgaaagactcggtcaacggctaa
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