Thioclava litoralis: RPE78_06680
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Entry
RPE78_06680 CDS
T10820
Name
(GenBank) ABC transporter ATP-binding protein
KO
K11085
ATP-binding cassette, subfamily B, bacterial MsbA [EC:
7.5.2.6
]
Organism
tlb Thioclava litoralis
Pathway
tlb02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
tlb00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
RPE78_06680
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tlb02000
]
RPE78_06680
Enzymes [BR:
tlb01000
]
7. Translocases
7.5 Catalysing the translocation of carbohydrates and their derivatives
7.5.2 Linked to the hydrolysis of a nucleoside triphosphate
7.5.2.6 ABC-type lipid A-core oligosaccharide transporter
RPE78_06680
Transporters [BR:
tlb02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
RPE78_06680
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_21
ABC_ATPase
AAA_16
AAA_29
AAA_22
AAA_30
RsgA_GTPase
AAA_5
SRP54
AAA_18
AAA_23
Motif
Other DBs
NCBI-ProteinID:
WRY34962
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All DBs
Position
1359399..1361141
Genome browser
AA seq
580 aa
AA seq
DB search
MAKRNIYTSRHMVARIWRDYLRPHVGWMAIALLLMVVEGSTLGALSWLLQPLFDKVFSGK
EPGLIYWAGGAVFALFLIRAATSIASKTIMTKISQSTSTAMQVDLVGHVLRLDQSFFQIN
PPGALIERIQGDTQAVQNIWKAFITGAGRDAISLVGLMAVALGVDVVWTLVAMVGFPLLL
APAVIAQRYIRRKTMQMRDSSSQRATRLDEMFHGINAVKLNRIEDQQTGRFRVLVNRIMG
QQIKMAATRALIPAMVDIVTGLGFFAVLVVAGHGILSGQRTVGEFMSFFTAMTLTFQPIR
RLAAGTGEWQTAAASLERIYTLFDLHPTVAAPLHPAQVPASLDITVENVTLSYGATQVLH
GLSFTAKEGQTTALVGPSGAGKSTVFALLSRLLDPDGGQILLGGADIRTLDLGQLRQMFS
TVAQDAALFDETIRENVLLGKTVSDERLRQALDGAYVSEFTQDLPEGIDTPAGPRGSALS
GGQRQRVAIARAILRDAPILLLDEATSALDTASEKRVSEALEKLSVGRTTLVIAHRLSTV
RNADKIVVIREGRVEDEGTHEELLARGGTYADLCAMQLIE
NT seq
1743 nt
NT seq
+upstream
nt +downstream
nt
atggccaaacgaaatatctatacctcgcgccatatggtcgcccggatctggcgcgactat
ctgcgtccgcatgtggggtggatggcgatcgccttgctgctgatggtggtcgaaggctcg
acgctgggggcgctgagctggctcttgcagccattgttcgacaaggtgttctccggcaag
gagccggggctgatctactgggcgggcggtgcggtttttgcgctgttcctgatccgtgcg
gccacctcgatcgcctcgaagacgatcatgacgaaaatctcgcaatcgacatcgacagcg
atgcaggtcgatctggtggggcatgtgttgcggctggaccagtcctttttccagatcaat
ccgcccggggcgctgatcgagaggattcagggcgatacgcaggcggtgcagaatatctgg
aaagccttcatcaccggtgcggggcgcgacgcgatctcgcttgtcggtctgatggccgtg
gctttgggggtggatgtggtctggacgctggtggcgatggttggctttccgctgctcttg
gctcctgcggtcatcgcgcagcgctatatccgccgcaagacgatgcagatgcgcgacagt
tccagccagcgcgcgacgcggctggacgagatgttccacggtatcaacgcggtcaagctg
aaccggatcgaggaccagcagacaggacgtttccgtgtgctggtcaaccggatcatgggt
cagcagatcaagatggccgcgacccgtgcgctgatccctgcaatggtggatatcgtgacg
gggcttggcttttttgccgtgctggtggtggcagggcatggcatcctgtcggggcagcgt
accgtgggggagttcatgtccttcttcaccgcgatgacgctgaccttccagccgatccgg
cgactggcggcgggcaccggtgaatggcagaccgccgcggcaagccttgagcggatctat
acgctgttcgatctgcacccgacggtggccgcgcccctgcatccggcacaggttccggcc
tcgctggatatcacggtggaaaacgtgacgctgtcctatggggcaacgcaggttctgcac
gggctcagcttcaccgccaaagagggccagaccacggctttggttggcccgtccggcgca
gggaaaagcaccgttttcgcgcttctgtcacgcttgctggaccctgacggggggcagatc
ctgttggggggcgcagatatccggacgctggatctgggccagttgcgccagatgttttcg
accgtggcgcaggatgcggccctgtttgacgagaccatccgcgagaatgtgttgctgggc
aagacggtgagcgacgagcgtctgcgtcaggcgctggacggggcctatgtcagcgagttc
acgcaggatctgcccgaggggatagacacgcctgccggtccgcgtggttcggctctgtcg
ggcgggcagcgccagcgggtggcgattgcccgcgccatcctgcgcgatgcgccgatcctg
ctgctggacgaggcgacctcggcgctggatacggcgtcggagaaacgggtgtccgaagcg
ctggagaagctgtctgtggggcggacgacgctggtgattgcccaccggttgtccaccgtg
cgcaatgccgacaagatcgtggtgatccgcgaaggccgtgtcgaggatgaggggacgcat
gaagagcttctggcgcgcggcggcacctatgccgatctctgcgcgatgcagttgatcgag
tga
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