Thioclava litoralis: RPE78_07070
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Entry
RPE78_07070 CDS
T10820
Symbol
gyrB
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
tlb Thioclava litoralis
Brite
Enzymes [BR:
tlb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
RPE78_07070 (gyrB)
DNA replication proteins [BR:
tlb03032
]
Prokaryotic type
DNA Topoisomerases
RPE78_07070 (gyrB)
DNA repair and recombination proteins [BR:
tlb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
RPE78_07070 (gyrB)
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NCBI-ProteinID:
WRY32481
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Position
1444687..1447137
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AA seq
816 aa
AA seq
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MTEEHVKKSEYGADSIKVLKGLEAVRKRPGMYIGDTDDGSGLHHMVYEVVDNGIDEALAN
YADYVHVKIHADSSVSVRDNGRGIPVDMHHEEGVSAAEVIMTQLHAGGKFNNTDTDGNAY
KVSGGLHGVGVSVVNALSDWLELTVWRDDKIYKARFEKGECVEHVHVVGEEVGGRGTEVR
FLASNKETDPEGTFSNLDYSFETLEKRLRELAFLNSGVRIIVEDERPAEPLKSELHYDGG
VREFVKYLDRSKTAVMDSPVYMIGEVNGIGVEVALWWNDSYHETVLPFTNNIPQRDGGTH
MAGFRGALTRTINNYAQSSGIAKKEKVNFTGDDAREGLTCVLSVKVPDPKFSSQTKDKLV
SSEVRPAVENLVNEKLGEWFEEHPAEAKQIVGKIIEAALAREAARKARELTRRKTAMDVA
SLPGKLADCQEKDPALSEVFLVEGDSAGGSAKQGRERKNQAVLPLRGKILNVERARFDRM
LSSDQIGTLITALGTGIGRDEFNIDKLRYHKIIIMTDADVDGAHIRTLLLTFFFRQMPEL
IERGYLYIAQPPLYKVARGKSEVYLKDQNALEDYLIAQGVEGAVLKLGTGEEIVGNDLQR
VVEEARVIKRILGTFPTLYPRHILEQAAIAGAMVPGVLDNDAQGTADAVAARLDLVALEY
ERGWQGRQTQDHGLRLTRILRGVEEVRTLDGQVMRAGESRRLGAHTKALQDIYGKPARLH
RKDRHQLIHGPLELLNAILQEGEKGLSLQRYKGLGEMNPEQLWETTLDPSARTLLQVKVD
DVAEADDIFTKLMGDVVEPRRDFIQQNALNVENLDF
NT seq
2451 nt
NT seq
+upstream
nt +downstream
nt
atgaccgaagaacacgtcaagaaatccgaatatggcgccgattccatcaaggttttgaag
gggttggaagctgtgcggaaacgccccggcatgtatatcggggatacggatgacgggtcg
ggcctgcatcacatggtctatgaggtcgtcgataacggtatcgacgaggctctggccaat
tatgccgactatgtgcatgtgaaaatccacgccgatagctcggtttcggtgcgcgataac
gggcgcgggattccggtcgatatgcaccatgaagagggcgtctcggcggccgaggtcatc
atgacccagctgcatgcgggcggtaagttcaacaacaccgataccgacggcaatgcctat
aaggtttcgggcggtctgcatggtgtgggcgtgtcggtggtgaacgcgctttccgactgg
ctggaactgaccgtctggcgcgatgacaagatctataaggcccgtttcgaaaagggcgaa
tgcgtcgagcatgtccatgttgtgggcgaagaggtcggcggccgcggcaccgaggtgcgc
ttccttgcgtcgaacaaggaaaccgaccccgagggcaccttctcgaacctcgattacagc
tttgaaacgctggaaaaacgcctgcgcgagctggctttcctgaattcgggcgtgcggatc
atcgtcgaagacgagcgccccgccgagccgctgaagtccgagctgcattatgacggtggc
gtgcgggaattcgtgaaatatctcgaccgctcgaagaccgctgtgatggacagtcctgtc
tatatgatcggtgaggtgaacggcattggcgtcgaggtcgcgctgtggtggaatgacagc
taccacgagaccgtgctgccctttaccaacaacatcccccagcgcgatggcggcacccat
atggcgggcttccgtggcgcgctgacccgcaccatcaacaattacgcgcagtcgtcaggc
atcgccaaaaaggaaaaggtcaactttaccggcgatgacgcccgcgaaggcctgacctgc
gtgctgtcggtgaaagtgccggacccgaaattctccagccagaccaaggacaagctggtc
tcctccgaggttcggcctgcggtcgagaacctcgtgaacgagaagctgggcgaatggttc
gaagagcatcccgccgaggccaagcagatcgttggcaagatcatcgaggcagcccttgcc
cgtgaagccgcccgcaaagcgcgcgagctgacgcggcgcaagacggcgatggatgtcgcc
tcgcttccggggaaactggcggattgtcaggaaaaagaccccgctctgtccgaagtcttc
ctcgtcgagggggattccgcaggtggttcggccaaacaggggcgcgagcggaaaaatcag
gcggtgctgccgctgcgtggtaagatcctcaacgtggaacgcgcgcggtttgaccggatg
ctgtcgtcggaccagatcgggacgctgatcactgcgcttggcaccggcattggccgcgat
gaattcaacatcgacaagctgcgctatcacaagatcatcatcatgaccgatgcggatgtc
gacggcgcccatatccgcaccctgctgctgaccttcttcttccgccagatgccggaactg
atcgaacgcggctatctctatatcgcgcagccgccgctgtataaggtcgcacgcggcaag
tccgaggtttacctcaaggaccagaacgcgctggaagattatctgattgcccaaggggtt
gagggggctgtgctgaagctgggcacgggcgaagaaatcgtcggcaatgacctgcagcgt
gtggtcgaagaggctcgcgtgatcaagcgtatccttggcaccttcccgacgctttacccg
cgccacatccttgaacaggccgcaatcgccggtgcgatggtgccgggcgtgctggataat
gacgcgcagggcacggcggatgctgtggccgcccgtctggatctggtcgcgctggaatac
gagcgtggctggcagggccgtcagacccaagatcacgggctgcgcctgacccgcattctg
cgcggtgtcgaagaggtccgcacgctggatggtcaggtcatgcgcgccggtgaaagccgc
cgccttggcgcgcatacgaaggcgctgcaggacatctatggcaagcccgcccgtctgcac
cgcaaggaccgtcaccagctgatccacggcccgctggaacttctgaacgcgatcctgcaa
gagggcgaaaaaggtctgtccttgcagcgctataaaggcttgggcgagatgaaccccgag
cagctgtgggaaaccacgctggatccctcggcgcggacgctgttgcaggtgaaagtggat
gatgtggccgaggccgatgacatcttcaccaagctgatgggcgatgtggtcgaaccccgc
cgcgactttatccagcaaaacgcgctgaacgttgaaaaccttgatttctaa
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