Thioclava litoralis: RPE78_07140
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Entry
RPE78_07140 CDS
T10820
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
tlb Thioclava litoralis
Brite
KEGG Orthology (KO) [BR:
tlb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tlb03016
]
RPE78_07140 (truB)
Enzymes [BR:
tlb01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
RPE78_07140 (truB)
Transfer RNA biogenesis [BR:
tlb03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
RPE78_07140 (truB)
Prokaryotic type
RPE78_07140 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
DUF1478
Motif
Other DBs
NCBI-ProteinID:
WRY32494
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All DBs
Position
1464086..1464988
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AA seq
300 aa
AA seq
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MARKKGRDVSGWLIIDKPAGMTSTSVVNKVRWALGAKKAGHAGTLDPAATGVLAVALGEA
TKTVPYITDADKCYRFQVRLGAATNTDDAEGEVIETSETRPSDDEIRAALPQFTGDIMQV
PPQFSAVKVDGERAYALARKGEEMELAARPLWVESLELVSRVDADTIELEMVCGKGGYVR
SIARDLGQALGCLGHVLWLRREWSGPFEAAQGVSLDEVDQLAKTPELDAKVLPLEIGLAD
LPELKCTPDGAVRLRNGNPGMVLASACEYGDEAWVSYEGVPLAVGVYKAGELHPSRVFNL
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
atggcacgtaaaaaaggtcgcgatgtttcgggctggctgatcatcgacaagcctgcgggg
atgacctcgacatccgttgtcaacaaggtgcgttgggcgcttggcgcgaagaaggcgggc
catgcgggcacgctggaccctgcggcaacgggggttctggccgtggctctgggcgaggcc
acgaagactgtgccctatattaccgatgccgataaatgctaccgttttcaggtgcgtctt
ggggcggccaccaataccgatgatgccgagggcgaggtgatcgagacctccgagacgcgc
ccgagcgatgacgagatccgtgccgctctgccgcaattcaccggcgatatcatgcaggta
ccgccgcagttttccgccgtgaaggtggatggcgagcgtgcctatgccttggcccgtaag
ggcgaggagatggaattggccgcgcgccccctctgggtcgagagcctcgaactggtctcg
cgcgtggatgccgatacgatcgagcttgagatggtctgtggcaagggcggttatgtgcgc
tcgatcgcccgcgatctggggcaggcgctggggtgcttgggccatgtgctctggctccgg
cgcgaatggtccggcccgttcgaggcagcgcagggggtcagccttgacgaggttgaccag
cttgccaagacgcccgagcttgatgccaaggtcctgccgctggagattggtctggccgac
ctgcccgagctgaaatgcacccccgatggcgcggtccgtctgcgcaatggcaatccgggc
atggttctggcctcggcctgcgaatatggcgacgaggcttgggtgtcctatgagggcgtg
cccttggccgtgggggtctacaaggcgggcgaattgcacccgagccgcgtgttcaacctg
taa
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