Thioclava litoralis: RPE78_07385
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Entry
RPE78_07385 CDS
T10820
Name
(GenBank) uracil-DNA glycosylase
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
tlb Thioclava litoralis
Pathway
tlb03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
tlb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
RPE78_07385
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tlb03400
]
RPE78_07385
Enzymes [BR:
tlb01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
RPE78_07385
DNA repair and recombination proteins [BR:
tlb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
RPE78_07385
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
WRY32541
LinkDB
All DBs
Position
1516835..1517689
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AA seq
284 aa
AA seq
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MTPEVLSPSDLSYDAALAALEWLCELGADEAQGDLAMDCYALPDRLAKPDLPAPVPAGAA
ATAGMLAASQATALPQRQAPPKVDQVGLARQAAGQARTLADLHEALDGFETCDLRKGARC
TVRAEGPEAARVMIIGDAPDREEDRAGRPFIGRSGHMLDRMFAAIGLRRDTPDRAAALFL
APVLPWRPPGQREPEASEIAMMRPFLARMVELVDPDVVVLMGNAACSAGLARRGITRLRG
EWSEAFGKPAIAMFSPVQLLRSAEAKRDSWADLLALRAKLDSLG
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atgacgcctgaagttctctcgccttccgatcttagctatgatgccgctttggcggcgttg
gaatggctgtgcgagctgggggcggacgaggcacagggcgatctggcgatggattgctat
gctttgcccgaccgtctggcaaagcccgatcttcccgctcctgttccggcgggtgcggca
gctacggcgggcatgctggccgcatcgcaggcgacggctttgccacagcggcaggccccg
ccgaaggtcgatcaggtcgggcttgcgcggcaggcggcagggcaggcgcgcacattggcc
gatctgcacgaggcgctggacggtttcgagacctgcgatctgcgcaagggcgcgcgctgc
accgtgcgtgccgaagggcccgaggcggcccgcgtcatgatcatcggggatgcgcccgac
cgcgaggaagaccgtgcggggcggcccttcattggccgttcggggcatatgctggaccgg
atgtttgccgccatcgggttgcggcgcgacacgcccgatagggcggcggcgctgtttctg
gctcccgtcctgccgtggcgtccgccggggcagcgtgagcccgaggcatcggaaatcgcg
atgatgcgtccgtttctggcgcggatggtcgagctggtcgatccggatgtcgtggtgctg
atgggcaatgccgcctgctcggcggggctggcacggcgcggcattacccgcctgcgcggc
gagtggtcggaggcgttcggcaagcccgccatcgcgatgttctcgccggtgcagcttctg
cgcagcgccgaggccaagcgcgactcatgggccgatcttctggcgctgcgggccaagctg
gacagtctgggctag
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