Thioclava litoralis: RPE78_07875
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Entry
RPE78_07875 CDS
T10820
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
tlb Thioclava litoralis
Pathway
tlb03030
DNA replication
tlb03410
Base excision repair
tlb03420
Nucleotide excision repair
tlb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tlb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
RPE78_07875 (polA)
03410 Base excision repair
RPE78_07875 (polA)
03420 Nucleotide excision repair
RPE78_07875 (polA)
03440 Homologous recombination
RPE78_07875 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tlb03032
]
RPE78_07875 (polA)
03400 DNA repair and recombination proteins [BR:
tlb03400
]
RPE78_07875 (polA)
Enzymes [BR:
tlb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
RPE78_07875 (polA)
DNA replication proteins [BR:
tlb03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
RPE78_07875 (polA)
DNA repair and recombination proteins [BR:
tlb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
RPE78_07875 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
RPE78_07875 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
Motif
Other DBs
NCBI-ProteinID:
WRY32636
LinkDB
All DBs
Position
1612327..1615173
Genome browser
AA seq
948 aa
AA seq
DB search
MAEGFGKGCHLHLIDGSAFIFRAYHALPPLTRKSDGLPIGAVSGFCNMLFKYVEEAKGAD
APTHVAVIFDKGSHTFRNDLYDQYKANREAMPEDLRPQIPLTRTATEAFNIACKELAGYE
ADDIIATLARQAREAGGRVTILSSDKDLMQLVGGGVEMLDPMKNVQIGPEEVEKKFGVTP
DKVIDVQALAGDSVDNIPGAPGIGIKTAALLINEYGDLETLLERAGEIKQPKRRQTLIDN
ADQIRLSKQLVTLDPETPIDFTLDDLEVRDPEPETLMKFLNEMEFRTLTRRVAEKSGTTP
PPALEPVAKATGGAAEAGGSAVTLPEAAPFTPENYVHIKDAATLAKWLDKARARGWLAID
TETTSLDEMQADLVGVSLAIEPNEAAYLPLGHTEGGDDLFGGAQLVPEQMGLQEALALLK
PVLEDPSILKIGQNMKYDFKILARHGIRMAPIEDTMLLSYSLHAGLHGHGMDTLSDRYLN
HQPIPIKDLIGSGKSQITFDKVPLEKAVAYAAEDADITLRLWQLFKPQLHAQKATTIYET
EERPLVPVLADMEMAGVKVDASVLARMSNVFAQKMAQLEDEITEIAGQKFNVGSPKQLGE
ILFDVMGVEGGKKGKTGAYSTGADVLEDITTMEDRNPAAAKLASAVLDWRGISKLKSTYT
DALQTHVNPETGRVHTSYSIAGANTGRLASTDPNLQNIPVRSDEGRRIREAFVAPEGRRI
VSLDYSQIELRILAHVAQIDALKQAFREGVDIHAMTASEMFNTPVEGMDPMIRRQAKAIN
FGVIYGISGFGLARNLRIPRAEAQGFIDRYFERFPGIRQYMEDTTAFAKEHAYVETLFGR
RINTPEINAKGPGAGFAKRAAINAPIQGAAADIIRRAMVRMPEAIKGIDATMLLQVHDEL
IFEVAEADVDRLIATAREIMEGAAEPAVKLDVPLIVDAGQGLSWAEAH
NT seq
2847 nt
NT seq
+upstream
nt +downstream
nt
atggcggaaggttttggcaaagggtgccacctgcatctgatcgacggatcggcgtttatc
ttccgcgcctatcatgcgctgccgccactgacgcgcaaatccgacgggttgccgatcggg
gcggtgtcgggcttttgcaatatgctgttcaaatatgtcgaagaggccaagggcgcggat
gcgccgacccatgtggcggtgatcttcgacaagggcagccataccttccgcaatgacctc
tatgaccagtataaggccaatcgcgaggccatgcccgaggatctgcgcccgcagatcccg
ctgactcgtacggccaccgaggcgttcaatatcgcctgtaaggaactggcgggctatgag
gcagatgacatcatcgccacccttgcccgtcaggcgcgcgaagcaggcggtcgggtgacg
atcctcagctccgataaggacctgatgcagcttgtcggcggcggggtcgagatgctggac
ccgatgaagaacgtccagatcggccccgaagaggtcgagaagaaattcggcgtgaccccc
gataaggtgatcgacgtgcaggcgcttgcgggcgattcggtcgataatattccgggcgct
ccggggatcggcatcaagacggccgcgcttctgatcaatgaatatggcgatctggagacg
ctgctggaacgggcgggtgaaatcaaacagcccaagcgccgccagaccctgatcgacaat
gccgaccagatccgcctgtcgaaacagcttgtgacgctggaccccgagacccccatcgat
ttcacgctggacgacctcgaggtccgcgaccccgagccggaaaccctgatgaaattcctc
aacgagatggaattccgcacgctcacccgccgcgtcgccgagaaatccggcaccacgccg
ccacccgcgctagagcccgtggcgaaagccacgggcggggccgccgaggcgggggggagc
gcagtgaccctccccgaggcggcccccttcacccccgagaattacgtccatatcaaggat
gccgcgacgcttgccaaatggctcgataaagcccgcgcgcgtggctggctggccatcgat
accgagaccacctcgcttgacgagatgcaggccgatctggttggcgtttcgctggcgatt
gaacccaatgaggccgcctatctgccgctgggccataccgagggtggcgatgacctcttc
ggtggcgcgcagcttgtgcccgaacagatgggcctgcaagaggcgcttgcgctcttgaaa
cccgtgctggaagacccctcgatcctcaagatcgggcagaacatgaagtatgacttcaag
atcctcgcccgccacggtatccgcatggcgccgatcgaggatacgatgcttctgtcctat
tcgctccacgccggtctgcatggccacgggatggacacgctttcggaccgctatctcaac
caccaacccattccgatcaaggatctgatcggctcggggaaatcgcagatcaccttcgac
aaggtgccgcttgagaaggccgtggcctatgccgccgaagatgccgatatcaccctgcgc
ctgtggcagctgttcaaaccgcagcttcacgcgcaaaaggccaccacgatctatgaaacc
gaagaacgcccgctcgtgccggttctggccgatatggaaatggcgggggtgaaggtcgat
gcctcggtgctggcgcgtatgtccaatgtcttcgcccagaagatggcgcagcttgaagac
gagatcaccgagatcgcaggccagaaattcaacgtaggctcgccgaaacagctgggcgag
atcctctttgacgtgatgggcgtcgagggcggcaagaagggcaagaccggtgcctattcg
accggcgccgatgtgctcgaagacatcaccacgatggaagaccgcaatcccgcagccgcc
aagctggcctcggcggtgctcgactggcgcgggatttccaagctgaaatccacctatacg
gatgcgctgcagacccatgtgaaccccgagacgggtcgcgtgcatacgtcctattccatt
gcgggggcgaatacggggcgtctggcctcgaccgacccgaacctgcagaatatccccgtc
cgctcggatgagggtcgccgcatccgcgaggcctttgtcgcccccgagggccgccggatc
gtcagccttgactacagccagatcgagctgcggattctggctcatgtcgcgcagatcgac
gcgctgaaacaggccttccgcgagggcgtggatattcacgcgatgaccgcctccgagatg
ttcaacacccccgtcgagggcatggacccgatgatccgccgtcaggccaaggcgatcaac
ttcggcgtcatctatggcatctctggcttcggtcttgcgcgcaacctgcgcatcccccgc
gccgaggcgcagggctttatcgaccgctacttcgagcgtttccccggcatccgccaatat
atggaggacaccacggccttcgccaaagagcacgcctatgtcgaaacgctcttcggtcgc
cggatcaacacccccgaaatcaatgccaaagggccgggggcgggctttgccaaacgcgcc
gcgatcaacgcgcccattcagggggcggctgccgatatcatccgtcgcgcgatggtgcgt
atgcccgaggcgatcaagggtattgacgcgaccatgctcctgcaggtccatgacgaactg
atcttcgaggtggccgaggctgatgtggaccggctgatcgccaccgcccgcgagatcatg
gaaggcgccgccgagcctgcggtgaagcttgatgtgccgctgattgtcgatgcggggcag
gggctttcctgggccgaggcgcattga
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