Thioclava litoralis: RPE78_09880 Help Entry RPE78_09880       CDS       T10820                                  Symbol groL Name (GenBank) chaperonin GroEL   KO K04077   chaperonin GroEL [EC:5.6.1.7] Organism tlb  Thioclava litoralis Pathway tlb03018   RNA degradation Brite KEGG Orthology (KO) [BR:tlb00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    03018 RNA degradation     RPE78_09880 (groL)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:tlb03019]     RPE78_09880 (groL)    03110 Chaperones and folding catalysts [BR:tlb03110]     RPE78_09880 (groL)    03029 Mitochondrial biogenesis [BR:tlb03029]     RPE78_09880 (groL)   09183 Protein families: signaling and cellular processes    04147 Exosome [BR:tlb04147]     RPE78_09880 (groL) Enzymes [BR:tlb01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.1  Enzymes altering polypeptide conformation or assembly     5.6.1.7  chaperonin ATPase      RPE78_09880 (groL) Messenger RNA biogenesis [BR:tlb03019]  Prokaryotic type   Bacterial mRNA degradation factors    Other RNA degradation factors     Chaperones      RPE78_09880 (groL) Chaperones and folding catalysts [BR:tlb03110]  Heat shock proteins   HSP60 / Chaperonin    RPE78_09880 (groL) Mitochondrial biogenesis [BR:tlb03029]  Mitochondrial protein import machinery   Matrix    Other matrix factors     RPE78_09880 (groL) Exosome [BR:tlb04147]  Exosomal proteins   Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)    RPE78_09880 (groL)   Exosomal proteins of other body fluids (saliva and urine)    RPE78_09880 (groL)   Exosomal proteins of breast cancer cells    RPE78_09880 (groL)   Exosomal proteins of colorectal cancer cells    RPE78_09880 (groL)   Exosomal proteins of bladder cancer cells    RPE78_09880 (groL) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Cpn60_TCP1 Motif Other DBs NCBI-ProteinID:  WRY33004 UniProt:  A0ABZ1DW59 LinkDB All DBs Position complement(2006521..2008170) Genome browser AA seq 549 aa AA seqDB search MAAKDVKFGTDARNRMLKGVNILADAVKVTLGPKGRNVVLDKSFGAPRITKDGVSVAKEI ELEDKFENMGAQMVKEVASRTNDEAGDGTTTATVLAQAIVREGMKAVAAGMNPMDLKRGI DQATSKVVEAIKAASRPVADSDEVAQVGTISANNEATIGRFIADAMQKVGNDGVITVEEN KGMETEVEVVEGMQFDRGYLSPYFATNGDKMVAELEDCLILLHEKKLSSLQPMVPLLEQV IQSQKPLLIIAEDVEGEALATLVVNKLRGGLKIAAVKAPGFGDRRKAMLQDIAILTGGQV ISEDLGMKLESVGMDMLGTAKKVTITKDNTTIVDGAGDKAEIEARVGQIRTQIEETTSDY DREKLQERVAKLAGGVAVIRVGGLTEVEVKERKDRVDDALNATRAAVQEGIVVGGGVALI QGAKSLEGVTGANADVDAGIAIVRRALEAPLRQIAENAGVDGAVVAGKIRESSDLKFGFN AQTEEYGDMFSFGVIDPAKVTRTALEDAASIAGLLITTEAMVADKPAKEGAGAPDMGGMG GMGGMGGMM NT seq 1650 nt NT seq  +upstreamnt  +downstreamnt atggcagccaaggacgtaaaattcggcaccgacgcacgcaatcgcatgctcaagggtgtc aacatcctcgcagacgcagtcaaagtgacgctgggcccgaaaggccgtaacgtcgttctc gacaaatccttcggcgcaccgcgcatcaccaaagacggtgtttcggtcgcaaaagagatc gaactcgaagacaagttcgagaacatgggcgcgcaaatggtcaaagaagtggcctcgcgc accaatgacgaagcaggcgatggcaccaccaccgcgaccgttctcgcacaagccatcgtt cgcgaaggcatgaaagctgtcgcagcgggcatgaacccgatggacctcaagcgcgggatc gaccaagcgacctccaaggttgtcgaagcgatcaaagccgcgtcgcgtccggttgcggat tccgacgaggttgcacaggttggcaccatctcggccaataacgaagccaccatcggccgc ttcattgcagacgcaatgcagaaagtcggcaatgacggcgtgatcaccgtcgaagaaaac aaaggtatggagaccgaggtcgaagtcgtcgaaggtatgcaattcgaccgcggctacctg tccccctacttcgcgaccaatggcgacaaaatggttgccgagctggaagactgcctcatc ctgcttcacgagaaaaaactctcgtcgctgcagccgatggtcccgctgctggagcaagtc atccagtcgcaaaaaccgcttctcatcatcgcagaagacgtcgaaggcgaagcactggcg accctcgtggtcaacaagctgcgcggcggcctgaaaattgcggctgtcaaagctcctggc ttcggtgatcgccgtaaggccatgctgcaggacatcgcgatcctgaccggcggtcaggtg atctcggaagatctgggcatgaagctggaaagcgtcggcatggacatgctgggcaccgcg aaaaaagtcacgatcaccaaagacaacaccaccatcgtggacggtgctggcgacaaggcg gagatcgaggcacgcgttggccagatccgcacgcaaatcgaggaaaccacctcggattac gaccgcgagaagctgcaagagcgtgttgcgaaactcgcaggcggtgtggcagtgatccgc gttggcggcctgaccgaagtcgaagtgaaagagcgcaaagaccgcgttgatgacgcactg aacgcaacccgcgccgctgtccaagagggcatcgttgtggggggtggtgttgctctgatc caaggcgcgaaatcgcttgaaggcgtgaccggcgcgaatgccgatgtcgatgcgggtatc gcaatcgtccgtcgcgcactggaagctccgctgcgtcagatcgctgaaaacgcaggtgtt gacggcgcggttgtcgctggcaagatccgtgaatcgagcgacctcaagttcggcttcaac gcgcagaccgaagaatatggcgacatgttctccttcggcgttatcgatccggcaaaggtc acccgcaccgcgctggaagacgcagcctcgatcgcaggcctgctgatcaccaccgaagca atggttgccgacaagcccgcaaaagaaggcgcaggcgcgccggatatgggcggcatgggc ggcatgggtggcatgggcggcatgatgtaa

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