Thioclava litoralis: RPE78_09930
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Entry
RPE78_09930 CDS
T10820
Symbol
choX
Name
(GenBank) choline ABC transporter substrate-binding protein
KO
K02002
glycine betaine/proline transport system substrate-binding protein
Organism
tlb Thioclava litoralis
Pathway
tlb02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
tlb00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
RPE78_09930 (choX)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tlb02000
]
RPE78_09930 (choX)
Transporters [BR:
tlb02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Glycine betaine/proline transporter
RPE78_09930 (choX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OpuAC
Motif
Other DBs
NCBI-ProteinID:
WRY33014
LinkDB
All DBs
Position
complement(2016611..2017540)
Genome browser
AA seq
309 aa
AA seq
DB search
MTYRSFLLAAAASMTLAVSAQAKGCNDVVFSDVGWTDITATTAVTTKLLEILGYKTETRV
LSVPVTYSALASGDVDVFLGNWMPTMQADIAPYIKAGTVDTVRTNLTGAKYTLATNAAGA
ALGIKDFADIAKHAKELRHQIYGIEPGNDGNRLIEDMIDANAFNLADFDVVESSEQGMLA
QVGRAVDREKPIVFLGWAPHPMNTNYDLTYLSGGDDWFGPDFGGAEVRTNTTAGYVDACP
NVGKLLENLEFSLEAENELMGAILDDGQDPDKAAQAWLKAHIAAVSPWLEGVTTRDGQNA
YAAFQAAMK
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atgacctatcgttcctttcttctcgcggctgctgcctcgatgacccttgcggtttcggca
caggcgaaaggatgcaacgacgtggtattttccgatgttggctggaccgacatcaccgcg
acaaccgctgtaacgacgaaacttctcgaaatactgggctacaagaccgaaacgcgtgtt
ctatccgtgcccgtcacctattctgcccttgcaagtggcgatgttgatgttttcttgggc
aactggatgcccacgatgcaggccgatatcgccccctatatcaaggctggcactgtggac
acggtccgcacgaatctgaccggtgccaaatataccctggccaccaacgccgccggagcc
gccctcggaatcaaggatttcgcggacatcgccaaacatgccaaagagctgcgccaccag
atctatggtatcgagccgggcaatgacggaaacaggcttattgaagacatgattgacgca
aacgcgttcaatcttgccgattttgacgtagtcgaaagctcggaacaagggatgctggca
caggttggccgcgcggtcgaccgcgagaaaccgattgtctttctgggctgggcaccacat
ccgatgaacaccaattacgacctgacctacctctccggaggggatgactggtttggtccg
gattttggcggggccgaagtgcgcaccaacacgaccgcaggctatgtcgatgcctgcccc
aatgttggcaagctgctggaaaatctcgaattctcgcttgaggctgaaaacgaattgatg
ggggcgatcctggatgatggtcaagaccccgacaaggctgcccaagcttggctgaaggcg
catattgcggccgtctctccttggctcgaaggggtaaccacccgcgacggccagaacgca
tatgcggcctttcaggcggcaatgaagtga
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