Thioclava litoralis: RPE78_10725
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Entry
RPE78_10725 CDS
T10820
Name
(GenBank) sigma-54 dependent transcriptional regulator
Organism
tlb Thioclava litoralis
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Response_reg
Sigma54_activat
Sigma54_activ_2
HTH_8
AAA_5
HTH_50
AAA_22
AAA_16
AAA
nSTAND3
FleQ
ATPase
AAA_7
ResIII
AAA_2
IstB_IS21
FtsK_SpoIIIE
HerA_C
DEAD
SLFN-g3_helicase
DAP3
Motif
Other DBs
NCBI-ProteinID:
WRY33163
LinkDB
All DBs
Position
2166501..2167829
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AA seq
442 aa
AA seq
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MSRMMKIAIVDDEEDMRQSVSQWLALSGFDTETYDCAEAALKEIGADWPGVVISDIRMPG
MDGMEFLKRLMGIDSGLPVIMITGHGDVPMAVEAMRLGAMDFLEKPFDPDRMNELAKRAT
QARRQTLENRAIRKDLANGEQMMGKLIGTSEPMERLREDILDLSQADGHVLIDGETGTGK
TLVAHALHATGSRAGKAMVTVSCAAYSEEDLATKLFGPVESGLPLVEKARGGTLCLEDIE
ALSQSLQARLLTFISEQGVPAETRIVAICNQHGEGTTLEDVLRPDLYFRLAALKITLPPL
RNRGEDVLTIFARMAEQFADEYGCDTPELTAQEAAQLLQAPWPGNVRQLINVAERAVLQA
RRGSGSIASLLMTDDNDSTIPAITTEGKPLKEYVENFEKMLIDNTMRRHKGSIASVMEEL
CLPRRTLNEKMAKYGLARQDYL
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcgaatgatgaagattgcaattgtcgatgatgaagaagacatgcgtcaatccgtc
agccaatggcttgccctgtcgggctttgacacggaaacttacgattgtgccgaggcggcg
ctgaaagagatcggtgccgattggcccggtgtcgtgatttccgacatccgcatgcccggc
atggacgggatggaatttctcaaacggctgatgggcattgatagtggcttgccggttatc
atgatcaccggtcatggcgatgtgccgatggcggtggaagcgatgcgtctgggggcgatg
gatttccttgaaaagcccttcgatcccgaccggatgaacgaactggccaaacgcgcgacc
caagcccgccgtcagacattggaaaaccgtgcgatccgcaaggatctggccaatggcgaa
cagatgatgggcaagttgatcggcacgtccgaaccgatggagcggttgcgcgaggatatt
ctcgacctcagtcaggccgatggccatgtgctgatcgatggcgagaccggcaccggcaag
acgctggtggcccatgctctgcatgcgacgggctcgcgggcgggcaaggcgatggtgacc
gtttcttgcgcggcctattccgaggaggatctggcgaccaagctgttcgggcctgtcgaa
agcggtctgccgctggtggagaaagcgcggggcggcacgctctgccttgaggatatcgag
gcgctctcgcaatccttgcaggcccgtctgctgaccttcatctccgagcagggcgtgcct
gcggagacgcggatcgtggcgatctgcaaccagcatggtgagggaacgacgctggaagat
gtgctgcgccccgacctctatttccggctggcggccctgaaaatcaccctgccgcccctg
cgcaaccgtggcgaggatgtgctgacgatcttcgcgcggatggccgagcagtttgcggat
gaatatggctgtgacacccccgagctgaccgcgcaagaggccgcacagctgctgcaggcc
ccttggccgggcaatgtgcgccagttgatcaatgttgccgagcgggccgttttgcaggcg
cgtcgcggctcgggttcgattgcctcgctgttgatgacggatgacaatgacagcactatt
ccggcgatcaccaccgagggcaagccgctcaaggaatatgtcgagaatttcgagaagatg
ctgatcgataataccatgcgccgccataaaggctcgattgccagcgtgatggaagaactc
tgtctgccgcgccggaccctgaacgagaaaatggccaaatacggtctggcccgtcaggat
tatctctga
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