Thioclava litoralis: RPE78_12715
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Entry
RPE78_12715 CDS
T10820
Symbol
ssb
Name
(GenBank) single-stranded DNA-binding protein
KO
K03111
single-strand DNA-binding protein
Organism
tlb Thioclava litoralis
Pathway
tlb03030
DNA replication
tlb03430
Mismatch repair
tlb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tlb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
RPE78_12715 (ssb)
03430 Mismatch repair
RPE78_12715 (ssb)
03440 Homologous recombination
RPE78_12715 (ssb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tlb03032
]
RPE78_12715 (ssb)
03400 DNA repair and recombination proteins [BR:
tlb03400
]
RPE78_12715 (ssb)
03029 Mitochondrial biogenesis [BR:
tlb03029
]
RPE78_12715 (ssb)
DNA replication proteins [BR:
tlb03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
RPE78_12715 (ssb)
DNA repair and recombination proteins [BR:
tlb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Other MMR factors
RPE78_12715 (ssb)
TLS (translesion DNA synthesis) factors
Other SOS response factors
RPE78_12715 (ssb)
Mitochondrial biogenesis [BR:
tlb03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial DNA replication factors
Other Mitochondrial DNA replication factors
RPE78_12715 (ssb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SSB
DUF6879
DUF3016
Motif
Other DBs
NCBI-ProteinID:
WRY33529
UniProt:
A0ABZ1DXM3
LinkDB
All DBs
Position
2573353..2573874
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AA seq
173 aa
AA seq
DB search
MAGSVNKVIIVGNLGRDPEVRSFSNGGKVCNLRIATSENWRDRNSGERKERTEWHSVAIF
SEPLAKIAEQYLRKGSKVYIEGQLETRKWQDQSGQDRYTTEVVLRPYRGELTLLDGRNDG
GQGGGGYGGGQGGGYGGPSSGGYDDGPSSGGYGGPSQSGGGSSRPDFDDEIPF
NT seq
522 nt
NT seq
+upstream
nt +downstream
nt
atggcaggatcggtcaataaggtcattatcgtgggtaacctcggccgtgatccggaagtt
cgcagcttttcgaatggtggcaaggtctgcaacctgcggatcgcgacctcggaaaactgg
cgtgaccgtaatagtggcgagcgcaaggaacgcaccgagtggcattcggtcgcgattttc
agcgagcctcttgcgaaaatcgcggaacaatatctgcgtaaagggtcgaaggtctatatc
gaaggccagcttgaaacccgtaaatggcaggatcaatccggtcaggaccgttacacgacc
gaagtcgtgctgcgcccctatcgcggcgaactgactttgctggatgggcgcaatgacggc
ggccaaggtggcggcggttacggtggaggtcagggcggcggctatggcgggccctcttcg
ggcggctatgatgacggcccgtcctcgggcggctatggcggcccgtcgcaaagcggtggc
ggcagcagtcgtcccgattttgacgacgagatcccgttctga
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