Thioclava litoralis: RPE78_12760
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Entry
RPE78_12760 CDS
T10820
Name
(GenBank) helicase HerA-like domain-containing protein
KO
K06915
DNA double-strand break repair helicase HerA and related ATPase
Organism
tlb Thioclava litoralis
Brite
KEGG Orthology (KO) [BR:
tlb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tlb03400
]
RPE78_12760
DNA repair and recombination proteins [BR:
tlb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Archaeal homologous recombinant proteins
RPE78_12760
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HerA_C
DUF87
AAA_30
ResIII
FtsK_SpoIIIE
AAA_22
AAA_10
SLFN-g3_helicase
AAA
TrwB_AAD_bind
T2SSE
AAA_16
AAA_7
ABC_tran
Hydrolase
nSTAND3
CbiA
AAA_19
Motif
Other DBs
NCBI-ProteinID:
WRY33538
UniProt:
A0ABZ1DYJ3
LinkDB
All DBs
Position
complement(2583807..2585354)
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AA seq
515 aa
AA seq
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MSDLSRPTRPNTLTETGIFVGGGGIDYQDVQSLRLDHGNRHGLIAGATGTGKTVTLQVLA
EGFSDAGVPVFMADVKGDLSGLAQAGSETAKLHKAFQARAETIGFDIRYRAYPTVFWDVF
GQQGIPVRTTISEMGPVLLTQLLGLSPAQEGVLHIAFHLADQEGLALLDLDDLRALLLYV
SEKADEIQARYGNVDARSIGAIQRQLLILETEGAGVFFGEPALSLPDMLRSAPDGRGQIN
ILAADKLINSPKVYATFLLWILSELFETLPEVGNPEKPVCAFFFDEAHLLFDDAPKPLLE
KIEQVARLIRSKGVGIYFVTQNPTDIPDDVLSQLGNRVQHALRAFTAKDQKNLERAAETY
RDNPRFSILDTLRDVGTGEALTSFLDRKGIPGIAERTLIRPPMSKLGPIADVDRQALIRS
CDLFEKYRQPVNPDSAYEILQRRAGQSQESAQPSEEKAHSHARRYSGTHSKSSSGSARRS
SDTILETFGKSFARQLGSRSGQALVRGLLGSLFRK
NT seq
1548 nt
NT seq
+upstream
nt +downstream
nt
atgagtgatctttcccgcccgacacggcccaatacgctgacagaaacagggattttcgtc
ggcggcggcggtatcgattatcaagacgtccagtccctgcgccttgaccacggcaaccgc
cacggcctgatcgcaggtgcgacaggaacaggaaaaaccgttaccttacaggttcttgca
gagggtttcagcgacgctggcgtgccggttttcatggcggatgtcaaaggcgatctctcc
ggattggcccaggccggcagtgagacagccaagcttcacaaggcttttcaagcgcgcgcc
gaaaccattgggtttgacatccggtatcgcgcctatccaactgttttctgggatgttttc
ggccagcagggcattccggtacgcacgacgatctcggaaatggggccggttcttctgaca
cagcttcttggactgtcgccggcgcaagaaggcgtattgcatattgccttccatctggcg
gaccaagaaggcctggcccttctcgaccttgatgacctgcgggcgctgcttctgtacgta
tctgaaaaagcggatgaaattcaggcacgctatggcaatgtcgatgcccgttccatcggc
gcgattcaacgccagttgcttattctcgaaacggagggggccggagttttttttggcgaa
cccgcgctatcgcttcccgacatgctgcggagcgcacctgacgggcgcggccagatcaac
attctggctgcagataaacttataaattcgccaaaggtttacgcgacattcttactatgg
attctctccgagctgtttgaaacgcttccagaggttggcaaccccgagaaacctgtttgc
gcctttttctttgacgaggcccatctgctttttgacgacgcccccaaacccttgctggaa
aaaatcgaacaggtcgcgcgtctaatccgctccaaaggggtaggcatctattttgtgacg
caaaatccgacggatattccggatgatgttctctcgcagcttgggaatcgggtgcaacat
gcgctgcgcgcgttcaccgcaaaagaccagaaaaatctggaacgcgctgccgagacatat
cgcgacaatccgcgcttttcgatcctcgatacacttcgggatgtcgggacaggcgaggct
ttgacctcgtttctggatcggaagggcattccgggcatcgccgaacgcacattgatccgc
ccgcccatgtcaaagcttgggccgatagcggatgtcgatcggcaggcgctcatccggtcc
tgcgatctttttgaaaaataccggcaaccggtcaaccccgactctgcctacgagattttg
caacgccgcgcgggccagagtcaggaaagcgcccaacccagcgaggaaaaagcgcatagc
catgcccgccgctatagcggaacccattccaaatccagctcgggcagcgcaagaagaagc
tctgatacaattctggaaacatttggaaaaagttttgcgcgccaattaggaagccgtagc
ggtcaggcattggtgcggggcctattgggatctcttttccgcaaatag
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