KEGG   Thioclava litoralis: RPE78_14480
Entry
RPE78_14480       CDS       T10820                                 
Symbol
tssC
Name
(GenBank) type VI secretion system contractile sheath large subunit
  KO
K11900  type VI secretion system protein ImpC
Organism
tlb  Thioclava litoralis
Brite
KEGG Orthology (KO) [BR:tlb00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:tlb02044]
    RPE78_14480 (tssC)
Secretion system [BR:tlb02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   RPE78_14480 (tssC)
SSDB
Motif
Pfam: VipB VipB_2 MHB BMFP
Other DBs
NCBI-ProteinID: WRY35456
UniProt: A0ABZ1E4R6
LinkDB
Position
unnamed1:complement(191349..192842)
AA seq 497 aa
MTDSLQAQGGQPAAALDELSEFSDILKQTIKPRSEVAAREVDNAVGALAREALLSQDLIS
EDVVDTLDAMIAKLDEQLSNQVNEIMHAEEFQKIESAWRGLAYTVNNSETDASLRVKVLN
MSKPELQAMMRRYPGAKWDKSPLFNAVYEQNLGTLGGKPFGCLIGDYYFDHSSPDVNLLN
SLGKISEAALAPFISGTAPELLGLDSWNEIGTPPDLSEVFETPEYAQWNSLRDSENSRFL
ALVAPRVLAREPYGPNSNSVVEEFNFEEETDGHDGKKYAWMNAAHAMATNINRAFKEYGW
TVRIRGVTSGGEVANLPTHLFDTGDGSKDMKCPTEVSITDRREGELSKAGLIGLIHRQHT
DKAAFIGAQSLYRPKTYVDDLATASDNMSSRIPYIFAVSRFSHYLKVMVRDKIGTSPDQL
QLQKQLQAWINKYVSGNPESASELEKARKPLAGAKVEVVEDELNPGYYQGKFYLRPHFQL
EGMDIGMSLVSKLPAGK
NT seq 1494 nt   +upstreamnt  +downstreamnt
atgactgattcccttcaggcccaaggcggccagcccgccgcagctcttgacgagctctcg
gagttctccgacatcctcaagcagaccatcaaaccgcgcagcgaagtggccgcgcgcgag
gtggataatgcagtgggtgcgcttgcgcgtgaggcgcttctttcgcaggatctgatctcg
gaagatgtggttgatacgctggatgcgatgattgccaagctcgacgagcagctgagcaat
caggtcaacgagatcatgcatgcggaagagttccagaagatcgagtccgcatggcgcggt
ctggcctatacggtcaataactccgaaaccgatgcctcgctgcgggtgaaggtcctgaac
atgtccaaaccggaactgcaggcgatgatgcgccgctatccgggtgcaaaatgggacaag
tcgccgctgttcaatgcggtttacgagcaaaatctcggcacgctgggcggcaagcccttc
ggctgtctgatcggggattactacttcgatcattcctcgccggatgtgaatctgctcaat
tcgctgggcaagatttcggaggccgcccttgcgcccttcatctctggcacggcccccgag
cttctgggtcttgatagctggaacgagatcggcaccccgccggatctgtccgaggtcttc
gagacccccgaatatgcacagtggaacagcctgcgtgacagcgagaattcgcgctttctc
gcgctggtggccccccgtgttctggcgcgcgagccctatggcccgaactccaattcagtt
gttgaagagttcaatttcgaagaagaaactgacggtcatgacggcaagaaatatgcctgg
atgaacgcggcccatgcgatggcgaccaatatcaaccgcgccttcaaggaatacggttgg
acggtgcgtattcgtggtgtgacttcgggtggcgaagtggcaaacctgccgacccatctg
tttgacaccggggacggctcgaaggacatgaaatgtccgaccgaagtgtcgatcaccgat
cgtcgcgagggcgagctgtcgaaagccggtctgatcgggctgatccatcgtcagcatacc
gacaaggccgcctttatcggtgcgcaatcgctctatcgtccgaagacctatgtcgatgac
cttgcaacggcctccgacaatatgtcttcgcgcattccctacatctttgctgtgtctcgg
tttagccattacctgaaggtgatggtgcgcgataaaatcgggacaagccccgaccagctc
cagctgcaaaaacagctgcaggcctggatcaacaaatatgtttcgggcaatcctgaaagc
gcgagcgagcttgaaaaagcccgtaaaccgctggcaggtgcaaaggtggaggtcgtcgaa
gacgagctcaaccccggctattaccagggtaagttctaccttcggcctcacttccagctg
gaaggcatggatatcggcatgtcgctggtatcgaagctgccggcagggaagtaa

DBGET integrated database retrieval system