Thioclava litoralis: RPE78_15930
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Entry
RPE78_15930 CDS
T10820
Name
(GenBank) ABC transporter substrate-binding protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
tlb Thioclava litoralis
Pathway
tlb02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
tlb00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
RPE78_15930
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tlb02000
]
RPE78_15930
Transporters [BR:
tlb02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
RPE78_15930
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
WRY35721
LinkDB
All DBs
Position
unnamed2:complement(26603..28192)
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AA seq
529 aa
AA seq
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MFLPKSSSGLLKGALVSVLLGASSVAAHAETTITAVMNAPLRALDPAISTAYILRNYGYM
VYDTLLARDEAGKVQPQMASWAVSEDGLTYTFTLRDGLKWHDGTPVTAADCVASIARWDQ
VDKTGQVMAKLMSAMEIVDDKSFTMTFAEPTGIALLALSKPSGIAPFMMPKAVAETPIST
PITSTIGSGPFKFDSASYQPGVQAVFLKNEDYVPRDEPSSGMAGGKVVKVDKVIWTAMPD
PMTALTAMMSGEVDFVEQVQQDLLPLVDGNPDFYTQAFAKQGSQNLVRLNWTQPPFDNLK
YREAAMAALGQKPMLNAQVGTAEDSSSTCAAVFGCSGPYATDYKAEEIIKANPEKSKELL
QEAGYDGKPIMLMQATDLASLAPQGPVIAQQLRDGGFKVDVVAMDWASVVARRASKAPVA
EGGWNIFSTTNVLPDVGDPVGFIGTAAGGDSAWFGWPDVPKIEELRASFAEAPDTASQVK
IAKEIDQLAIDNVVMIPMGEFANINVVSAKLQGMPEAEAPVFWNVTKSE
NT seq
1590 nt
NT seq
+upstream
nt +downstream
nt
atgtttcttccgaagtcctcttcggggctgctcaagggtgcgctggtatcagtgcttttg
ggagccagctctgtcgccgcccatgccgaaaccaccattaccgccgtgatgaatgcgccc
ctgcgcgcgctcgatccggcgatcagcacggcctatatcctgcgcaattacggctatatg
gtctatgacacgctgctggcgcgcgacgaggccggcaaggtccagccgcagatggccagc
tgggcggtttcggaggacgggctgacctatacgttcaccctgcgcgacgggctgaaatgg
catgatggcacgccggtgacggcggcggattgtgtggcctcgatcgcgcgttgggatcag
gtcgacaagaccggtcaggtgatggccaagctgatgagcgcaatggaaatcgtggacgat
aaatccttcaccatgacctttgccgaaccgacggggatcgcgcttctggcgctgtccaag
ccctcggggattgcgcctttcatgatgcccaaggccgtggccgagacgccgatttccacg
ccgatcacctcgaccatcggctccggcccgttcaaattcgacagcgcgtcctatcagccg
ggggtgcaggcggtctttctgaaaaacgaggactatgtgccgcgtgacgaaccctccagc
gggatggcgggcggcaaggtcgtgaaggtggataaggtcatctggaccgccatgcccgac
ccgatgaccgccctgactgccatgatgtcgggtgaggtcgattttgtggaacaggtgcag
caggatcttctgccgctggtcgatggcaaccccgatttctacacgcaggccttcgccaaa
cagggcagccagaacctcgtgcggctgaactggacgcaaccgccctttgacaacctcaaa
taccgcgaggccgcgatggccgcgcttggccagaaacccatgctgaacgcgcaggtgggc
acggctgaagacagctccagcacctgtgccgccgtcttcggctgttccggcccttatgcc
accgactataaggccgaggagatcatcaaggccaatcccgagaaatccaaggaactgctg
caagaggcgggctatgacggcaagcccatcatgctgatgcaggccaccgatctggcgtct
ctggcgccgcagggtccggtgattgcccagcagttgcgcgatggcggcttcaaggtggat
gtggtcgcgatggattgggccagcgtcgtggcgcgccgcgcgtccaaggcgccggtggcc
gagggtggctggaacatcttctcgacgaccaatgtgctgcccgatgtgggcgatccggta
ggctttatcggcacggcggcaggcggggatagcgcctggttcggctggccggatgtgccg
aagatcgaagagctgcgcgcctcatttgccgaagcgcccgacaccgcgtctcaggtcaag
atcgccaaggagatcgaccagctggccattgataacgtcgtgatgatcccgatgggggaa
ttcgccaatatcaacgtggtctcggccaagctgcagggcatgcccgaagcggaagccccc
gtcttctggaatgtgaccaagtcggagtga
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