Thioclava litoralis: RPE78_15950
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Entry
RPE78_15950 CDS
T10820
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
tlb Thioclava litoralis
Pathway
tlb03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
tlb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
RPE78_15950 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tlb03400
]
RPE78_15950 (uvrB)
DNA repair and recombination proteins [BR:
tlb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
RPE78_15950 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
RPE78_15950 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
AAA_22
AAA_19
DUF87
TrwB_AAD_bind
AAA
Kinesin
Motif
Other DBs
NCBI-ProteinID:
WRY35725
UniProt:
A0ABZ1E4V3
LinkDB
All DBs
Position
unnamed2:32850..35036
Genome browser
AA seq
728 aa
AA seq
DB search
MPHNNTNLPTERPDVLTKPKLEGGRRFVMHSEFSPAGDQPTAIAELSQGVRDNERDQVLL
GATGTGKTFTMAKIIEETQRPAIILAPNKTLAAQLYGEFKGFFPENAVEYFVSYYDYYQP
EAYVPRSDTYIEKESQINEQIDRMRHSATRALLERDDVIIVASVSCIYGIGSVETYSAMT
QDLKVGELYEQRKFLADLVAQQYKRLDAAFVRGSFRVKGDTVDLWPAHLEDRAWRFAFFG
EELEAITEFDPLTGAKSDSFDQIRIYANSHYVTPRPTLNQATKGIKKELGLRLKQLNDEG
KLLEAQRLEQRTNFDLEMLEATGVCNGIENYSRYLTGRAPGEPPPTLFEFIPDNAIVFAD
ESHVTVPQIGGMYRGDYRRKFTLAEHGFRLPSCMDNRPLKFEEWDAMRPQSVFVSATPSK
WEMEQTGGIFAEQVIRPTGLLDPVIEIRPVETQVDDVLDEIRLVAAKGLRTLVTTLTKRM
AEDLTEYLHEQGVRVRYMHSDIDTIERIEILRDLRLGAFDVLIGINLLREGLDIPECGLV
AILDADKEGFLRSTTSLIQTVGRAARNADGRVIMYADKITGSMQAAMDETERRRAKQIAY
NEEHGITPQTVRKNVEDVLAGLYQGDTDMSRVTAKVDKVKPGANLQAHLDSLRAEMRKAA
ENLEFEEAARLRDEVKRLEAVELAVSDDPMARQSAVEEASDAAVNSRGRSTAGRPGQRGG
NVQRRKKR
NT seq
2187 nt
NT seq
+upstream
nt +downstream
nt
atgccccataacaacaccaatctgcccaccgaacgccccgatgtgctgaccaagcccaag
ctggaaggcggtcggcgctttgtgatgcattcggaattctcgcccgcaggcgaccagccc
acggccattgccgagctgtctcagggcgtgcgggacaacgagcgcgatcaggtgctgctg
ggggcgacgggcacgggcaagaccttcaccatggccaagatcatcgaagagacccagcgt
cccgcgatcatccttgcgcccaacaagacgctggccgcccagctgtatggcgagttcaag
ggcttcttccccgagaatgccgtcgaatatttcgtgtcctattacgactactaccagccc
gaggcctatgtgccgcgctcggacacctatatcgagaaagaatcccagatcaacgaacag
atcgaccggatgcgccactcggccacgcgggcgcttctagagcgtgacgatgtgatcatc
gtggcctcggtctcctgtatctatggtatcggttcggtcgaaacctattccgccatgacg
caggatctgaaggtgggcgagctttacgagcagcgcaaattcctcgccgatctggtggcg
cagcagtataagcgccttgatgcggcctttgtgcgcgggtccttccgtgtgaagggcgat
acggtcgatctttggcctgcccaccttgaagaccgcgcatggcgctttgccttctttggc
gaagagctcgaggcgatcaccgaattcgacccgctgacgggggcgaaatccgacagtttc
gaccagatccggatttacgccaatagccactacgtcaccccgcgcccgacgctgaaccaa
gcgaccaagggcatcaagaaagaactcggtctgcggctgaagcagctgaacgacgagggc
aagctgctggaggcccagcggctggaacagcgcaccaatttcgacctcgagatgctggag
gccacgggcgtctgcaacgggatcgagaattattcgcgctatctcacgggccgcgcacct
ggcgagccgccgcccaccctgttcgaattcatccccgataacgcgattgtctttgccgat
gaaagccatgtcaccgtgccgcagatcggcggcatgtatcgcggcgactaccggcgcaaa
ttcacgctggccgaacatggcttccgcctgccgtcctgcatggataaccggcccctcaag
ttcgaggaatgggacgcgatgcgcccgcagtcggtctttgtctcggccacccccagcaaa
tgggagatggagcagaccggtggtatctttgccgaacaggtgatccgcccgacgggcctt
ctggatccggtgatcgagatccgccctgtcgagacccaagtcgatgatgtgctggatgag
atccgtctggttgccgccaaggggctgcgcacgctggtcaccacgctgaccaagcgtatg
gccgaagatctgaccgaatatctgcacgaacagggtgtgcgggtgcgctatatgcatagc
gatatcgacacgattgaacgcatcgagatcctgcgtgacctccgccttggggcgtttgac
gtgctgatcgggatcaaccttctgcgcgagggtctggatattcccgaatgcgggctggtg
gcgatcttggatgccgataaggagggcttcctgcgctcgaccacctcgctgatccagacg
gtgggccgtgcggcgcggaacgccgatggccgcgtgatcatgtatgccgataagatcacc
ggatcgatgcaggccgcgatggacgagaccgagcgtcgccgtgccaagcagatcgcctat
aacgaggaacatggcatcaccccgcaaaccgtgcgcaagaatgtcgaggatgtgctggcg
gggctttatcagggcgataccgatatgtcgcgtgtcactgccaaggtcgataaggtcaaa
cctggggcgaaccttcaggcgcatctggacagcctgcgcgccgagatgcgcaaggccgcc
gagaacctcgaattcgaggaagccgcccgcctgcgcgacgaggtcaagcggcttgaggcg
gtcgagctggccgtctcggatgacccgatggcgcggcaatcggcggtggaagaggcctct
gacgctgcggtcaattcgcgtggcagatccaccgcaggccgccccggccagcgcggcggc
aacgtccagcggcgcaaaaaacgctaa
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