Thioclava litoralis: RPE78_16985
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Entry
RPE78_16985 CDS
T10820
Symbol
miaB
Name
(GenBank) tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB
KO
K06168
tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:
2.8.4.3
]
Organism
tlb Thioclava litoralis
Brite
KEGG Orthology (KO) [BR:
tlb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tlb03016
]
RPE78_16985 (miaB)
Enzymes [BR:
tlb01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.3 tRNA-2-methylthio-N6-dimethylallyladenosine synthase
RPE78_16985 (miaB)
Transfer RNA biogenesis [BR:
tlb03016
]
Prokaryotic type
tRNA modification factors
Methylthiotransferases
RPE78_16985 (miaB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM
LuxC
TRAM_2
Motif
Other DBs
NCBI-ProteinID:
WRY35552
LinkDB
All DBs
Position
unnamed2:260238..261596
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AA seq
452 aa
AA seq
DB search
MPDSKLDTVETPAVPVLKKLHIKTYGCQMNVYDSERMAEAMGGEGYVLTDSPEEADMVLL
NTCHIREKAAEKVYHELGRLRPLKEANPNLKIGVAGCVAQAEGEEIRRRMPLVDMVVGSQ
SYHKLPAMTRAVDRGEKPVDTDFPVEDKFEHLPERPVQARPTAFLTVQEGCDKFCAFCVV
PYTRGAEVSRPVARILGEARKLVEKGVREITLLGQNVNAYHGEGEEGTWSLARLVRELAK
IEGLDRIRYTTSHPNDMEDDLIAAHGDEPKLMPYLHLPVQSGSDRILKAMNRKHTAAEYI
RLIERIRAARPDLVLSGDFIVGFPGETDQDFEDTMELVRKVGYGAAYSFKYSARPGTPAA
DRTDAVPAEVADERLQRLQALITQQQRATQEAMVGRECFVLFEKPGRQEGQWVGKSDYLQ
AVHVKGENIRPGTLARVRITASGPNSLAGELI
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atgcccgattccaagcttgataccgttgagacgcccgccgttccggtgctgaagaagctg
catatcaagacctacggctgccagatgaacgtctatgacagcgagcgtatggccgaggcg
atgggcggcgagggctatgtcctgaccgacagccccgaagaggccgatatggtgctgttg
aacacctgccacatccgcgagaaggccgccgagaaggtctatcacgagctgggccgcctg
cgtccgctcaaagaggccaatccgaacctgaagatcggggtggcgggctgtgtggcgcag
gccgagggcgaagagatccgccgccgcatgccgctggtggatatggtggtgggctcgcaa
agctatcacaagctgcccgcgatgacccgcgcggtggatcgcggcgagaagccggtggat
accgatttccccgtcgaggataaattcgaacatcttcccgagcgccccgtgcaggcgcgc
cccaccgcctttctgacggtgcaggaaggctgcgacaagttctgcgccttctgcgtggtg
ccctatacccgcggggccgaggtctcgcgccctgtggcccgcatcttgggcgaggcgcgc
aagctggtcgagaagggcgtgcgcgagatcaccctcttgggtcagaacgtcaacgcctat
cacggcgagggcgaggagggcacctggtctctggcgcgtctggtgcgcgaattggccaag
atcgaggggctggaccggatccgctataccacctcgcatcccaacgacatggaagacgat
ctgatcgccgcgcatggggatgaacccaagctgatgccctatctgcatctgccggtgcaa
tcgggctccgaccgtattctgaaggcgatgaaccgcaagcatacggcggcggaatatatc
cgcctgatcgaacgtatccgtgccgcccgccccgatctggtgctttcgggcgatttcatc
gtgggcttccccggcgagaccgatcaggatttcgaggatacgatggagctggtgcgcaag
gtgggctatggcgcggcctattcgttcaaatattccgcccgtccgggcacgcctgcggca
gatcgcaccgatgccgtgcctgccgaggtggccgatgagcgtctgcaacgtctgcaggcg
ctgatcacccagcagcagcgcgccacccaagaggcgatggtcgggcgcgaatgtttcgtg
ctgttcgaaaagccgggccgtcaggagggccaatgggtcggcaagtcggattatctgcaa
gcggttcacgttaaaggtgaaaatatccgccccggtacattggcacgggtccgcattacg
gcgtcgggccccaattcgcttgccggagagctgatctga
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