Thiothrix lacustris: RCF98_00695
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Entry
RCF98_00695 CDS
T09396
Symbol
dapE
Name
(GenBank) succinyl-diaminopimelate desuccinylase
KO
K01439
succinyl-diaminopimelate desuccinylase [EC:
3.5.1.18
]
Organism
tlc
Thiothrix lacustris
Pathway
tlc00300
Lysine biosynthesis
tlc01100
Metabolic pathways
tlc01120
Microbial metabolism in diverse environments
tlc01230
Biosynthesis of amino acids
Module
tlc_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
tlc00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
RCF98_00695 (dapE)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
tlc01002
]
RCF98_00695 (dapE)
Enzymes [BR:
tlc01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.18 succinyl-diaminopimelate desuccinylase
RCF98_00695 (dapE)
Peptidases and inhibitors [BR:
tlc01002
]
Metallo peptidases
Family M20
RCF98_00695 (dapE)
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SSDB
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M20
M20_dimer
Motif
Other DBs
NCBI-ProteinID:
WML90885
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All DBs
Position
146904..148043
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AA seq
379 aa
AA seq
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MSATLDLAIDLISRPSVTPLDEGCQQLLADRLAPLGFVAEHLRFGDVDNIWLRRGTTSPV
FCFAGHTDVVPTGPLDAWDSPPFQPEIRDGMLYGRGTADMKGSIAAFTIACETFVRENPN
HQGSIAFLITSDEEGPSINGTVKVVEWLEQRNEKIDWCLVGEPSSTCCVGDVVKNGRRGS
LNGILTVIGQQGHVAYPHLADNPIHRAAPALAELVSIEWDKGNEFFPPTSFQISNIKGGT
GANNVIPGTMTVEFNFRFSTEQTEASLREQVEAIFQRHGFKHELKWTLSGSPFLTARGDL
VTASVAAIQAVNGVSTELSTAGGTSDGRFIAPTGAQVMELGPVNKTIHQINECVAVDDLN
ALTIIYQKILERLLPEAKG
NT seq
1140 nt
NT seq
+upstream
nt +downstream
nt
atgtccgctaccctcgatcttgctatcgacctgatttcacgcccctccgtcaccccgctg
gatgaaggttgccaacaattactggctgatcgccttgcaccgttaggtttcgttgccgaa
catctgcgctttggtgacgtggataatatctggctacggcgcggcacgacttccccagta
ttttgctttgccgggcataccgatgttgtaccgaccgggccattggatgcgtgggatagc
cccccgttccaaccggaaatccgtgacggaatgctctacgggcgtggcacggcggatatg
aaaggcagcattgccgcattcaccattgcttgcgaaaccttcgtgcgcgaaaaccccaac
caccaaggttcgattgcgtttttgatcaccagtgacgaagaaggcccttctatcaatggc
acagtcaaagtcgtcgaatggctggaacaacgtaacgagaaaatcgactggtgtctggta
ggcgaaccttccagcacctgttgcgtaggcgatgtggtgaaaaacgggcgacgcgggtcg
ctcaatggcatcttgaccgtgattggtcagcaagggcatgtggcctacccacatctggcg
gataacccaattcaccgcgcagcacctgccttggcagaactggtgagcattgaatgggat
aagggcaacgaatttttcccaccaaccagcttccagatttccaatatcaaggggggcacg
ggtgcgaacaacgtaatcccgggaacgatgacggtggaattcaacttccgcttttcgacc
gagcagaccgaagcaagcttacgtgaacaggtggaagcgattttccagcgccacggcttc
aagcatgaactgaagtggacattatcggggagtccgtttttgacagcgcggggcgatttg
gtcacggcaagcgtagctgctattcaggcagtcaacggggtaagcaccgaactgtcaacc
gcaggcggcacatccgacggacgtttcattgcgcccaccggtgcacaggtcatggagcta
ggccccgtcaataaaaccattcaccaaatcaatgagtgcgttgcggtcgatgacctgaac
gcactcacgattatctaccagaaaatcctggaacgtttattgccggaagcgaagggctag
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