Thiothrix lacustris: RCF98_00735
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Entry
RCF98_00735 CDS
T09396
Name
(GenBank) DUF853 family protein
KO
K06915
DNA double-strand break repair helicase HerA and related ATPase
Organism
tlc
Thiothrix lacustris
Brite
KEGG Orthology (KO) [BR:
tlc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tlc03400
]
RCF98_00735
DNA repair and recombination proteins [BR:
tlc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Archaeal homologous recombinant proteins
RCF98_00735
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HerA_C
DUF87
FtsK_SpoIIIE
AAA_22
ResIII
AAA_10
TrwB_AAD_bind
AAA_30
T2SSE
Hydrolase
ATPase
DUF2397
Motif
Other DBs
NCBI-ProteinID:
WML90892
LinkDB
All DBs
Position
155380..156882
Genome browser
AA seq
500 aa
AA seq
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MSEQSGILIGKGETQVFLNPRFANRHGLIAGATGTGKTISLQVLAEGLSRIGVPVFLADI
KGDLTGIAAPGKPHPKVDERVAKIGIDDFRFEGHPTVIWDLSGERGHPVRATISDMGPLL
LARLLDLNDTQEGVLNIAFKVADDQGMLLLDLKDLRAMLQHLGENSKALSNSYGNVSSAS
IGAIQRQLLILEQQGADQFFGEPALDLWDFMRTGANGYGNINILAADRLINTPRLYATFL
LWLLSELFENLPEVGDMDKPRLVFFFDEAHLLFNGAPKALVDKVEQVVKLIRSKGVGIYF
ITQTPLDVPESVLGQLGNRIQHALRAFTPRDQKAVRTAAETFRQNPNINTAETIMQMGVG
EALVSVLDDKGIPGIVQHVLISPPHSRIGPLTDAERADILRTSPFSGRYDTMIDRESAYE
LLQKRAETAAAETAEQEAEMAAQKATRTSNSRAPREPESLLGSLGEAFVKNAVKAATSSA
GRRIGTQIVRGILGSLFKGR
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
atgtcagaacagagcggaatcctgatcggtaaaggcgaaacgcaggtgttcctgaacccg
cgttttgccaaccgccacggcctcatcgcaggcgctacgggcacgggtaaaaccatttcc
ctgcaagtattggcggaaggtttatcgcgtatcggcgtacccgtattcttggctgacatc
aaaggcgacctcaccggtattgctgcccccggcaaacctcaccccaaagtcgatgaacgt
gttgccaaaatcggcattgacgatttccgctttgaaggccatcccaccgtcatttgggat
ttatccggggaacgcgggcatccagtgcgtgccacgatttccgacatggggcctttgctg
ctggcccgtttgctcgacctcaacgacacccaagaaggcgtcttgaacattgccttcaaa
gtggctgatgaccaaggcatgttgctgctggacctgaaagacttacgtgccatgttgcaa
cacctcggtgaaaacagcaaagccctgagtaacagctatggcaacgtcagctccgcctcc
atcggcgcgatccaacgccaactactgatactcgaacagcaaggtgccgatcagtttttc
ggcgaaccagcgctggatttgtgggacttcatgcgtaccggagccaacggttacggcaat
atcaacattctcgccgcagaccgcctgatcaacacgccgcgcctgtacgccacgttccta
ttgtggttgctctcagaactgtttgaaaacctgcctgaagttggcgacatggataagcca
cgcttggtattcttcttcgatgaagcccatctgctgttcaatggcgcacccaaggcactg
gtggataaagtcgagcaagtcgtcaaactgatccgctccaaaggcgtgggcatttacttc
attacccaaactccgttggatgtgcccgaatccgtactaggacaactcggcaaccgcatc
cagcacgccctgcgggctttcaccccacgtgatcagaaagctgtgcgcaccgccgccgaa
accttccgccaaaatcccaacatcaacaccgctgaaaccattatgcaaatgggggttggt
gaagcactggtttccgtgctggatgacaagggtattcccggcatcgtgcaacacgtcctc
atcagcccgccacactcgcgcattggtccactcactgatgctgaacgtgctgatatccta
cgtaccagcccgttctcaggccgctacgacaccatgatcgaccgcgaatcggcttacgaa
ctcctgcaaaaacgtgccgaaacggcagcggcagaaacggccgaacaggaagcagagatg
gcagctcaaaaagccacacgcactagcaacagccgtgctcctcgtgaacctgagagtctc
ctcggcagtcttggtgaagccttcgtgaaaaatgcggtaaaagcagccacatccagtgcc
ggacgacgtattggtacacaaatcgtgcgcggtattcttggctccctgttcaaagggcgc
taa
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