Thiothrix lacustris: RCF98_01270
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Entry
RCF98_01270 CDS
T09396
Symbol
rlmN
Name
(GenBank) 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN
KO
K06941
23S rRNA (adenine2503-C2)-methyltransferase [EC:
2.1.1.192
]
Organism
tlc
Thiothrix lacustris
Brite
KEGG Orthology (KO) [BR:
tlc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tlc03009
]
RCF98_01270 (rlmN)
Enzymes [BR:
tlc01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.192 23S rRNA (adenine2503-C2)-methyltransferase
RCF98_01270 (rlmN)
Ribosome biogenesis [BR:
tlc03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
RCF98_01270 (rlmN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RlmN_N
Radical_SAM
Baculo_F
Radical_SAM_2
YfiO
Motif
Other DBs
NCBI-ProteinID:
WML90996
LinkDB
All DBs
Position
277648..278751
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AA seq
367 aa
AA seq
DB search
MSDTVKKVNLLDFSHEGLKAYFTSMGEKPFRATQIIKWLHQLNVDSVDQMTNISKPLRQF
LTDNTVIRAPEIVMEQQSSDGTYKWLLRLDDGNAIETVFIPEDDRGTLCVSSQVGCALDC
TFCSTARQGFNRNLTTAEIIGQLWVAKRALQADPKGARVVSNVVMMGMGEPLLNFENVIS
ALRLMMDDNAYGLSKRRVTLSTSGVLPALDRLADTLDVSLAVSLHAPNDELRDQLVPLNR
KYPIKDLLAMCRQFLNKKTTERNHITWEYVMLDGINDSDENAHQLAKILKGIPSKINLIP
FNPFPETRYKRSSNNRIHRFRDILAEAGYTVITRKTRGDDIDAACGQLAGQVNDKSRREI
HFARIER
NT seq
1104 nt
NT seq
+upstream
nt +downstream
nt
gtgtctgacactgttaaaaaagttaatctgctggattttagccatgaagggctgaaagcg
tatttcacttctatgggtgaaaagccttttcgtgccactcaaatcatcaaatggctgcat
cagcttaatgttgatagtgttgaccagatgaccaacatcagcaaaccgttgcgccaattt
ttgacagacaatacggtcattcgcgccccggaaatcgtgatggaacaacaatccagcgat
ggaacctacaaatggttgctgagactggacgatggcaatgctatcgaaacggtgttcatc
ccggaagacgaccgggggacgctatgcgtttcctcgcaagtcggctgtgcactggactgc
accttctgctccaccgcccgccaaggtttcaaccgcaacctgacaactgccgaaatcatc
ggacaattgtgggtagcgaagcgtgcactgcaagctgatcccaaaggtgcgcgtgtcgtc
agcaacgtggtaatgatgggcatgggtgaacccttgctaaacttcgagaatgtcatcagt
gccttacgcttaatgatggatgacaatgcttacggcttaagtaaacggcgcgtcaccctc
agcacctctggcgtattgcctgcgctggatcgtttagcggatacattagatgtctcgtta
gccgtttccttacatgcccctaatgatgaactgcgtgaccaactggttcctttgaaccgc
aaatacccgatcaaggacttgctcgccatgtgccgccagttcctgaacaaaaaaaccacc
gaacgtaatcatattacgtgggaatacgtgatgttggatggcatcaacgacagcgatgaa
aacgcccatcaactggcgaaaatcctcaaaggcattccctcaaaaatcaatctcattccg
tttaatcccttcccggaaacacgttacaagcgctccagcaacaaccggatacaccgcttc
cgtgatattttagctgaagcaggttatactgtaatcacccggaaaacacgtggtgatgat
attgacgcagcctgtgggcaattggctggtcaagtcaacgacaaaagccgcagagagata
catttcgcccgcatcgaacggtaa
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integrated database retrieval system
