Thiothrix lacustris: RCF98_01500
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Entry
RCF98_01500 CDS
T09396
Symbol
prpF
Name
(GenBank) 2-methylaconitate cis-trans isomerase PrpF
KO
K09788
2-methylaconitate isomerase [EC:5.3.3.-]
Organism
tlc
Thiothrix lacustris
Pathway
tlc00640
Propanoate metabolism
tlc01100
Metabolic pathways
tlc01120
Microbial metabolism in diverse environments
tlc01200
Carbon metabolism
Module
tlc_M00982
Methylcitrate cycle
Brite
KEGG Orthology (KO) [BR:
tlc00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
RCF98_01500 (prpF)
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Gene cluster
GFIT
Motif
Pfam:
PrpF
Motif
Other DBs
NCBI-ProteinID:
WML91041
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Position
333257..334435
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AA seq
392 aa
AA seq
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MSQIPQIKIPATYMRGGTSKGVFFKLTDLPDVAQVPGAARDAVLLRVIGSPDPYGKQTDG
MGGATSSTSKTVILAKSEQPDHDVDYLFGQVSIDKAFVDWSGNCGNLTAAVGSFAISNGL
VDASRLPQNGMAVVRIWQKNIQKTIVANVPMTNGEVQETGDFELDGVTFPAAEVQVEFIS
PVDATDAMFPTGNLVDELEVPGVGTFQATMINAGIPTVFLNADAIGYTGCELQDAINGDP
KALAMFETIRAYGAVKMGLIADVAEAAGRQHTPKVAFVGKPQAYVSSSGKQINATDIDLN
VRALSMGKLHHAMMGTAAVAIGTAAAIPGTLVNLAAGGGDRSVVTFGHPSGTLKVGAAAS
ATNGDWKVEKVVMSRSARVLMEGWVRIPGDSF
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
atgtcccaaatcccgcaaatcaaaatccccgccacgtatatgcgtggcggcacgtccaag
ggcgtgtttttcaaactgaccgacttgcccgatgtcgcgcaagtccccggtgcggcgcgt
gacgcggtcttgctgcgcgtgatcggcagccctgacccgtatggtaagcaaaccgacggc
atgggcggcgcaacgtccagcaccagcaaaaccgtgattctggcgaaaagcgaacagcct
gatcatgacgtggattacctgtttgggcaggtttccatcgacaaggcatttgtggactgg
agcggtaactgcggcaacttgaccgcagcggttggctctttcgccatcagcaacggcttg
gtggatgcttctcgcctcccgcaaaacggcatggccgtggtgcgtatctggcagaaaaac
atccagaaaaccatcgttgccaacgtgccgatgaccaatggcgaagtgcaagaaaccggc
gatttcgagctggatggcgtgaccttcccagcggcagaagtgcaggtggaattcattagc
ccagtcgatgcgacggatgccatgttccccaccggcaatctggtggatgaactggaagta
ccgggtgttggcacctttcaggcgaccatgatcaacgcgggtattcccaccgtgtttttg
aatgcagacgccattggttacaccggctgcgaattgcaggacgccatcaacggcgaccct
aaagcgctggccatgtttgaaaccatccgcgcttacggtgcggtgaaaatgggtttgatt
gccgatgtcgcggaagcggctggtcgtcaacacacgcctaaagtggcgtttgtgggcaaa
ccacaagcctacgtgtcgtccagtggcaaacagatcaacgccaccgacattgacctgaat
gtacgcgccctgtcgatgggcaaactgcaccatgccatgatgggtacggcggcggtggct
atcggcacagccgctgcgattcccggcaccttggtcaacctcgctgcgggcggtggtgat
cgcagtgttgtgaccttcggacacccttccggtacgctgaaagtgggcgctgccgctagt
gccaccaacggtgactggaaagtggaaaaagtcgtgatgagccgcagtgcgcgggtattg
atggaaggctgggtacgcattcctggcgacagtttttaa
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