Thiothrix lacustris: RCF98_01605
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Entry
RCF98_01605 CDS
T09396
Name
(GenBank) outer membrane beta-barrel protein
KO
K03286
OmpA-OmpF porin, OOP family
Organism
tlc
Thiothrix lacustris
Brite
KEGG Orthology (KO) [BR:
tlc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tlc02000
]
RCF98_01605
Transporters [BR:
tlc02000
]
Other transporters
Pores ion channels [TC:
1
]
RCF98_01605
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OmpA_membrane
OMP_b-brl
Autotransporter
Motif
Other DBs
NCBI-ProteinID:
WML91061
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All DBs
Position
355615..356232
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AA seq
205 aa
AA seq
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MKMTLAMSLLIGLASNAYADDYMMGNNFNNGPKLYVGASAGSSKLGDTCNDPFFSGNCND
QDFAWKAFGGARLNPMTGVELTYYDLGSSSMNGTTGGSSAKMDSSTTGTGLTGVGYVPLT
PQIEAFGKAGAIAWDNKTSKTVAGNPSEQENATGTSALIGGGAQFQLNNNLRVRGEWEHM
FNIGSDSAYETDADLYSLGLSYSTL
NT seq
618 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatgacattggccatgagtctccttatcgggttagccagtaatgcatacgcagac
gattacatgatgggcaacaacttcaacaatggccctaaattgtatgttggggctagtgcg
ggtagctctaaacttggcgatacctgcaatgaccccttctttagcggtaattgcaacgat
caagactttgcgtggaaagcctttggtggcgcacgccttaaccccatgaccggggttgaa
ctcacttactacgatctcggcagcagtagcatgaatggcacgaccgggggcagcagcgcc
aaaatggacagcagtaccaccggaactggccttactggcgttgggtacgtgccactcacc
ccacaaatcgaagcttttggcaaagcaggtgccatcgcgtgggacaataaaaccagtaaa
acggttgctggcaatcccagtgaacaagaaaatgctactggtacgagtgctttgatcggc
ggcggtgcacagttccagctaaacaacaatttgcgcgtgcgtggcgagtgggaacacatg
tttaacattggttctgactctgcttacgaaaccgatgctgacctgtattcactcggtttg
agctattccacactctga
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