Thiothrix lacustris: RCF98_01675
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Entry
RCF98_01675 CDS
T09396
Name
(GenBank) PilC/PilY family type IV pilus protein
KO
K02674
type IV pilus assembly protein PilY1
Organism
tlc
Thiothrix lacustris
Brite
KEGG Orthology (KO) [BR:
tlc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
tlc02044
]
RCF98_01675
02035 Bacterial motility proteins [BR:
tlc02035
]
RCF98_01675
Secretion system [BR:
tlc02044
]
Type II secretion system
Pilin secretion/fimbrial assembly protein
RCF98_01675
Bacterial motility proteins [BR:
tlc02035
]
Pilus system
Pilus assembly proteins
RCF98_01675
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
T4P_PilY1
PQQ_3
Motif
Other DBs
NCBI-ProteinID:
WML91075
LinkDB
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Position
366585..370280
Genome browser
AA seq
1231 aa
AA seq
DB search
MRHSITSLQRYLLQWLALLSITFGLSSPSFAGVDISQAPLVVSGGVADNLVLLPSVEWPT
INSVANLGDYNQTTAYVGYFDAEKCYSYHYANTESDRYFYPSELATNHTCSTSEQYWSGN
FLNWAATQTIDPFRSSMTGGYRVKDTTTETWLEKARHDGQGSSSIFPNRTLPSSGTDNTL
VKKTTPFDSYVVSSKKKQTVTDVDYIQMRIQGLGNKMRFSLNNTNATSASSVTAYDPDTH
TRTTGTDASTVYEVSIRVKVCVPGMLETNCEAYGDNYKPEGLMQEYASRLRYSIFGYLND
SVTYRDGAALRTKQKSIGPMLANLNSEVEEDNPNKEWDAATGILIQNPDSQDAADTNTKL
GINTIKDSGAINYLNKFGQMTSQNHKSYDPVGEMYYAGLRYIRNLDNVAAYSTISSSASS
TAKYNYADGFPVITNWGDPYQASCQSTALLGIGDINTHRDKNLPGNTSYRTDEPTMPTEV
AADNINVVALTNKVGQMEGLGNIGSTNSFSGRNNSAYMAGMAWYANTKDLRPETNMPGTQ
SAATYWVDVMENQVLGSMNVNQYALAAKYGGFNVPDGVSFNPDTWSGALPDTWWWTNGQI
LTQPSTDFKRPDNFFIAGQASEMVENLKEAFDRIVNDILGAGASLASVSSKLTTGSRIYQ
TVYFSRSWNGDIHAFDINPTTGKFASTATWKASEQLPVWSSRNIFMRNDQPFRWNNLSDT
EKTALGSSDIVDYLRGDASHEQKNSGTLRNRVTPLGDMIQSQAVIISKPDDSLYLGKSFS
GAADHKDFAAANSGRTGTLYVGGNDGMLHGFNAQTGAETYAFIPSTTLPAMRELASKAYE
HRYFVDGEVTAADIYTQGKWKTILLATLGRGGKAIFALDVTDPEKVEFLWEKNATDIPAL
GNNLGKPLIAQTADGTWQAVLGNGMNSTGDKAQLIMINIDTEDVTVMDTGVGSNNGLTAV
AGWSAYGDSIATEFYAGDINGNLWRFPANGNNNTSPVKLFTAKDKDNNPQPITAAPLTGK
DPLTGKVWVFFGTGKYLSESDITTTDSQTWYGLKDEGNLITRDELLERKSEVEGELEGYE
VRVIETGLASDVDTWKGWYIDLPTEGERMVTPNFFQADALIGTSRIPNGTDICTPTGKGF
IMAINPFPGARLDRVFFDLNDDALFNDDDKLTIDKIPTIVSGVGFGSSPHSPVFIDNLMQ
VVSDNGSIVGILTQGFSGIPTRTSWREILNH
NT seq
3696 nt
NT seq
+upstream
nt +downstream
nt
atgagacatagcataacaagccttcagcgatacctactccagtggctagcactgctcagc
atcaccttcggtttgtcttcaccctcttttgccggtgtcgatatttcacaagcaccgctg
gttgtttctggtggtgtagcagataacctcgtgttgttaccttcagttgagtggccaacc
attaacagtgttgccaatctaggggactacaaccagaccaccgcatacgttggctatttc
gatgctgaaaaatgttattcctatcattatgccaacaccgaaagtgatcggtatttttac
ccttctgagctagccaccaaccatacctgctcaacgagcgagcaatattggagtggtaat
ttccttaactgggcggcgacccaaactatcgacccgttccgctccagcatgacgggtggg
tatcgcgtcaaagataccaccactgaaacatggctggaaaaagcacggcacgatggtcaa
ggtagtagcagcatttttcctaaccgtaccttgccctcctctggtaccgataataccttg
gttaagaaaacgaccccattcgacagctatgtagtcagcagtaagaagaagcagacggtc
actgatgtcgattacatacagatgagaattcagggtttaggcaataaaatgcgtttcagt
ctgaataacacgaatgcaacctcagccagcagcgtcaccgcgtatgaccccgatacgcac
acacgcaccacaggcacagacgcgagcaccgtgtatgaagtcagtatccgcgtgaaggtg
tgtgtgccgggaatgctggaaaccaactgcgaggcttacggtgacaactacaaaccggaa
ggtttgatgcaggaatatgccagccgcttacgctacagtatttttgggtatttgaatgac
agcgtgacgtatagggatggagctgccctacgtaccaagcaaaaatccatcggaccgatg
ctagcaaatctgaatagcgaagtagaagaagacaatccgaataaagaatgggatgccgca
acaggtattttaatccaaaaccccgattcacaagatgccgccgacaccaataccaaactc
ggcatcaacacgattaaagacagtggcgctatcaactacctcaataaattcgggcaaatg
accagccaaaaccataaaagctacgacccagttggtgagatgtattacgcaggtctacgc
tatatccgtaatctcgataatgttgctgcatactcaaccatcagtagctctgctagctca
acggctaaatataattatgccgatggctttccagtgattaccaactggggagatccctat
caagcctcctgccaaagcaccgcgttgttaggaatcggcgatattaatacacacagggac
aaaaacttaccgggcaataccagctaccgaacagatgaacccaccatgcccacggaagtg
gctgctgataatatcaacgtggtggccttaaccaacaaagtcgggcaaatggaagggctg
ggcaatatcggcagcaccaacagcttttcaggcaggaacaactcggcctacatggcgggt
atggcttggtatgccaacacaaaagacttgcgcccagaaactaacatgccgggtacacag
tccgccgccacttactgggtggatgtgatggaaaatcaggtgttgggaagcatgaatgtc
aaccaatacgcgctcgcagccaaatacggcggttttaatgtcccagatggggtcagtttc
aacccggatacctggagtggggcattgcctgacacttggtggtggactaacgggcaaata
ctgactcaaccatctaccgatttcaaacgcccggataacttcttcattgccggacaagcc
tccgaaatggtggaaaaccttaaagaagcctttgaccgtatcgttaatgacattttgggc
gcgggtgcatcactggcatccgtctcctccaaactgaccacgggcagccgcatctaccaa
accgtgtatttcagccgttcatggaatggtgacatacatgcgtttgacatcaacccgact
accggaaaatttgccagcaccgccacctggaaagcatcggagcaattacctgtatggagt
tcacgcaatatcttcatgcgtaacgaccagccctttcgttggaataatttaagcgacacc
gaaaaaacggcgctaggctcatctgacattgtggattatttacggggtgatgcctctcat
gaacagaaaaacagcggaacattacgcaaccgtgtcacccccctaggcgacatgattcag
tctcaagcagtcatcatcagcaagccggatgatagtttgtatcttggcaaaagtttcagc
ggagcagcggatcacaaagactttgctgccgcaaactcaggccgcacaggaaccctttac
gtcggcggcaacgacggcatgttgcacggctttaacgcccaaacaggtgctgagacttac
gcttttattccctcaaccacgctccccgcgatgcgtgagctggccagcaaagcctatgag
caccggtactttgtggatggagaagtgacagctgctgatatttatacgcaaggcaaatgg
aaaaccattttattggcaaccctcgggcgcggaggaaaagcgatctttgcgctggatgtg
accgaccctgaaaaggtggaattcctctgggaaaaaaatgccaccgacatacccgcttta
ggcaacaatctgggcaagcccctgattgcacaaacagctgatggcacttggcaagctgtc
ttaggtaatggcatgaacagtactggcgataaagcacaactgatcatgatcaatattgat
actgaagacgtcactgtcatggatactggcgtcggtagcaataatggcttaaccgctgtt
gcaggctggagcgcctatggcgatagcatcgcgaccgaattttatgcgggggatataaac
ggtaacttatggcgcttccctgctaatggcaacaataacactagtccagtgaagctcttt
accgcaaaggataaagacaataatccacagcccatcaccgctgcccccttaacgggtaaa
gatcctttaaccggcaaggtatgggtgttctttggtacagggaaatacctatccgaatcg
gatattaccaccactgattcccaaacgtggtatggcctcaaggacgaaggaaatcttatt
actcgcgacgaattgttggaacgaaaatcagaggtcgagggtgaattagaaggttacgaa
gtacgcgtcattgaaacgggtttagcctctgacgtggatacatggaaggggtggtatatt
gacttaccaacggaaggagagcgcatggttacgcccaacttctttcaggctgatgcctta
attggcacttcccgcatcccgaatggcacggatatctgcacgccaacaggaaagggcttc
attatggccatcaaccccttcccgggcgctcgtttagatcgggtgttttttgatcttaat
gacgatgccctgtttaatgatgatgataaactgactattgataagatccccactatcgtc
tctggcgtcggtttcggcagcagcccacacagtcccgtttttattgataacttgatgcaa
gtcgtcagtgacaatggaagcattgtcggcattcttacccaaggtttttcaggtatccct
acccgaacatcttggcgcgaaattcttaatcattaa
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